Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   AAH980_RS08655 Genome accession   NZ_CP154856
Coordinates   1862040..1866563 (-) Length   1507 a.a.
NCBI ID   WP_284080692.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain Ab25     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1857040..1871563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAH980_RS08625 (AAH980_08625) elsL 1857733..1858236 (-) 504 WP_000077301.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  AAH980_RS08630 (AAH980_08630) - 1858447..1858815 (-) 369 WP_004885387.1 YbaN family protein -
  AAH980_RS08635 (AAH980_08635) - 1858920..1859813 (+) 894 WP_233930490.1 DUF1853 family protein -
  AAH980_RS08640 (AAH980_08640) - 1859926..1860069 (+) 144 WP_002051109.1 entericidin A/B family lipoprotein -
  AAH980_RS08645 (AAH980_08645) dapE 1860195..1861328 (+) 1134 WP_284080694.1 succinyl-diaminopimelate desuccinylase -
  AAH980_RS08650 (AAH980_08650) - 1861576..1862043 (-) 468 WP_284080693.1 hypothetical protein -
  AAH980_RS08655 (AAH980_08655) chpA 1862040..1866563 (-) 4524 WP_284080692.1 hybrid sensor histidine kinase/response regulator Regulator
  AAH980_RS08660 (AAH980_08660) - 1866711..1868792 (-) 2082 WP_284080691.1 methyl-accepting chemotaxis protein -
  AAH980_RS08665 (AAH980_08665) - 1868839..1869375 (-) 537 WP_004885375.1 chemotaxis protein CheW -
  AAH980_RS08670 (AAH980_08670) - 1869433..1869795 (-) 363 WP_002051151.1 response regulator -
  AAH980_RS08675 (AAH980_08675) pilG 1869822..1870205 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  AAH980_RS08680 (AAH980_08680) - 1870488..1871126 (+) 639 WP_004885373.1 hypothetical protein -

Sequence

Protein


Download         Length: 1507 a.a.        Molecular weight: 171528.10 Da        Isoelectric Point: 4.3592

>NTDB_id=994070 AAH980_RS08655 WP_284080692.1 1862040..1866563(-) (chpA) [Acinetobacter nosocomialis strain Ab25]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWMQSENTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQTLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLKLS
NTLTAETMTGLELDYIEQNSLAEPIVEDVDTEIAINLDETLTLFMEEAEEHLTTIHQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYREFIRDSLKLLSKHSSNEQLDARLQQFNQSWDAYVEQ
HGDRTDPLTPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYDV
LLDKPLLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSVHNDLSQQDPTSVEPLFNIEP
EPEAAVTLENLSDSADWAVLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGSITHELESIYERLIQKQLVATSPLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQNSNFQPVPMVEVFDSESEIFSEQELISEVLIDEVPAEIEPVLTELEVHDDQVVIDNVVTELATPVEAITSVTSQENEA
VVEEQDITAVVEQTFLEEAAELLEMADGLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFA
LHHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPAKLTKTDLFSSEPVMTFIQGDGTEPPPM
MGAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAK
HGIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLL
PRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQKVNKPEAGRIELNIQRQGTD
VVVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEEQDILQLIFHPGLSTAEQITQISGRGVGLDVVQSDIKALGGHVSVD
SVYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQ
PMPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQS
TPRHKQLNEAVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGF
EVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4524 bp        

>NTDB_id=994070 AAH980_RS08655 WP_284080692.1 1862040..1866563(-) (chpA) [Acinetobacter nosocomialis strain Ab25]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAAATTTTCGTTGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTATTAAATGAATGGATGCAGTCTGAGAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTCCACACTTTAAAAGGTTCTGGAAGAATGATCGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGACACGCTTAATCGCGTAATTAATCAAACCCTTAAATTGACTCCAGCAATCCAGAGCTA
TGTTCAATTAGTATTTAAGTTCTATTTTCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTTC
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTAAAACTTTCA
AATACGCTTACTGCCGAAACAATGACTGGGCTTGAGCTAGACTATATTGAGCAAAACTCATTGGCTGAGCCAATTGTTGA
AGACGTAGATACTGAAATTGCAATAAATCTAGATGAAACTTTGACCTTGTTTATGGAAGAGGCAGAGGAGCATTTAACTA
CAATTCATCAGTTCTTAAATCAAGAGCTGCATCAGTATGATAGTTATAATGCCTTAATACGCGCGCTACATACTTTGCGT
GGCAGTTCTGCGATGGCGCAGGTCGAAACAATTTTTGAAGCCAGTACCAAAGTTGAGCACTTATTTAAAATACTGTTGCA
AGAAGAACTTTCTTCTAACTCAGATGAAATTTTATTATTACAAGAATATCGTGAGTTTATTAGAGATAGCTTAAAGCTTC
TATCTAAACATAGTTCAAATGAACAGCTTGACGCGAGATTGCAGCAGTTTAATCAATCATGGGATGCTTACGTTGAGCAA
CATGGTGACCGAACAGATCCATTAACACCTTCTCATGGTTTGGTATCACAACTATTGTTGTTAGATGTTTCTGAATTGTT
AGATGCAGAGTTAGATTTTGAGAAAGGCATTCGTAATGAGTTTCCAGATTATCTTGAACGTCTAAGTGAACAAGCTGATC
TACTGTTACAACATACACACTCTCAAGCAATGCTGGGGTTACATGAATATACCAGTCAATTGAAAGAAAGTTATGATGTA
TTACTTGATAAACCTCTATTATTGCAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTTATTCAATT
GTTCGATGCCTTGGCTGCTGGTCAGCGAGTTGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CCCTACATACTCCGAGCGTACACAATGACCTGTCTCAGCAAGATCCTACTTCTGTTGAGCCACTATTTAATATCGAACCA
GAGCCAGAAGCTGCTGTTACGTTAGAGAATTTATCAGACTCTGCAGACTGGGCAGTATTAAGCCAGAGTGTACAGCAAGA
TCGCCAATATATTTCCTCTACACAGGTAAATCAAAACTTTGATCCTGACCTTTTAGATATCTTTCTTGAAGAAGCTGATG
AGCTACTGGAGGGAATTGATACCGATCTCAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCCCTGAATAATCTAATG
CGCTATTTGCATACCTTGAAAGGTGGAGCAAATATGGTTCAGGCGACTTATCTAGGTTCGATTACCCATGAATTAGAAAG
CATATATGAGCGTTTAATTCAAAAGCAGTTAGTTGCAACTTCACCTTTAATTGATTTTATCCGTTTAGTACAAGATGACT
TGGCTGACCGTCTGCAAATCATGCGTGAACAACAATTAGATTATGCAGCTCCTTACACAATTAATGCGTTAAAACGAGCA
GGTCAAAACTCTAACTTCCAACCTGTACCAATGGTTGAAGTATTTGATAGTGAAAGTGAGATCTTCTCTGAACAAGAGCT
GATATCTGAAGTATTAATCGATGAAGTACCGGCAGAAATTGAGCCTGTTCTTACAGAATTAGAAGTTCATGATGATCAGG
TGGTAATTGATAACGTTGTTACTGAGTTAGCTACGCCAGTTGAAGCAATAACATCCGTTACATCACAAGAGAATGAAGCG
GTAGTTGAAGAACAGGATATTACGGCTGTTGTTGAGCAGACATTCTTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGA
TGGGCTATTGAAACAATGGTTTGAGCAGCGTACAAACCGAAGTATCTTGCTTCAATTACAAAGAGCTGTGCACAGTTTGA
AGGGTGGTGCACGAATGGTCGGTTTAGAAGCCGTCTACGCGATTGCCTATCAACTCGAAAATACATTCGAACAATTTGCA
CTGCATCACTTCAACTCGAATATTTATGATCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCTATTTTCAAGCA
TAACTATCAACATTTCGATGGATTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCGGCTA
AGTTAACGAAAACTGATTTGTTTAGCTCAGAACCTGTGATGACCTTCATACAAGGTGATGGTACAGAACCACCACCAATG
ATGGGCGCATGGGAGCAAACAGAACGTCTGGATCAGAACAATGAAATGATCCGTGTTTCAGCAGACTTGATTGAGAAAAT
GATTGACTTGTCTGGTGAGAACTCGATTAACCGTTCACGAATTGAAATGGACTTGAGTCAGTTCGGTCATACATTGGCTG
AAATGGAATTGGCTATTCAACGACTGGCCGATCAGTTACGACGAATGGAAGGCGAGTTAGAAACACAAATTATTGCTAAA
CACGGTATTGAGCATTCTCGCTATACCGACTTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAACCAGTTATCGAA
ATCTCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTCACAAGATCAGAGATACAGAAAGTTTGC
TTTTACAACAGTCGCGTATTCAGGCAGAAATTCAAGAAGGCTTGATGCGAACACGATTGGTTCCATTTTCACGTTTGTTA
CCGCGTTTGCAGCGGATTGTGCGTCAAACATCTACAGCCTTGAATAGACCTGCTGAGCTTTTCGTAAATAATACCGAAGG
TGAGTTAGACCGTAACATTTTAGAACGCTTAGTGACACCACTCGAGCATATGCTCAGAAATGCAATTGACCATGGTCTAG
AAGACCGGGCACAGCGCCAAAAGGTGAATAAACCGGAAGCAGGGCGTATTGAACTGAACATTCAGCGTCAAGGAACAGAC
GTTGTTGTTGTCTTTAGCGATGATGGACAAGGTATTGATGTTGAAAAAGTGCGCCAAAAAGCACTGCTTGCTGGTCTGAT
CAAGCCAGAACAAGATTTAGAAGAGCAAGATATTCTACAGCTAATTTTCCATCCAGGTTTAAGTACCGCAGAACAGATTA
CTCAGATTTCTGGACGTGGTGTTGGTCTTGATGTCGTACAGAGCGATATTAAAGCTTTAGGTGGACATGTTAGCGTTGAC
TCTGTTTATGGTAAGGGAACAACATTTACGATACGTGTACCGACTACTGTAGCTGTAAGTGATGCCTTAATGGTAAAAGT
GGCAGATCAGCAATTTGCAATTCCACTTGCTCAAATCGATCGAATTGTTCGAGTTTCGCCAGCTTCTTTAGAGCAGTATT
TTGAAAGCCCTAAAGAACTATTTGAATATGAAAATAAGCGATATCCCTTACGTTATCTTTCTGAATTTGTTGGTAATCAA
CCAATGCCACGACTAAATGGCATGATGTATTCATTACCTGTCTTAATGATTAAAGCCAACAATGGTCAAACTGTGGCGTT
ACTTGTCGATCAGTTAATTGGTTCTCGAGCTCAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGAGCAA
TTGCAGGTGCGACCATCTTAGGTGATGGACAGGTTTGTTTAATTTTAGACGGGCAAAATATTGCGCGACAAATTCAGTCT
ACACCGCGTCATAAACAGCTCAATGAAGCAGTATATAGACAACGTGAATCAGACGAGCGCCGTCTCGTTATGATTGTCGA
TGACTCCGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCTAAAGATGGCG
TTGATGCCATAGAACAGCTAGAAAATATTAAGCCAGATTTGATGCTGCTTGATATTGAAATGCCACGTATGGATGGTTTC
GAAGTACTTAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGTGAAAA
ACATCGTGAACGGGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCGTTCCAAGAAGAAGAGTTACTAGAAAATA
TTGATGCTTTACTTGTAGCATTTGAAAGTGAGGTCAAATCATGA

Domains

Predicted by InterproScan.

Hpt domain (Hpt)

(523-612)

Hpt domain (Hpt)

(25-106)

Hpt domain (Hpt)

(733-797)

Hpt domain (Hpt)

(199-282)

Response regulator receiver domain (Response_reg)

(1383-1494)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1079-1215)

CheW-like domain (CheW)

(1222-1357)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

92.435

100

0.924

Multiple sequence alignment