Detailed information NTG0099393

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QMG88_RS17085
• Genome accession: NZ_AP027052
• Coordinates: 3707946..3708962 (-)
• Length: 338 a.a.
• NCBI ID: WP_004405331.1
• Uniprot ID: A0AAV2VI73
• Organism: Vibrio nigripulchritudo strain TUMSAT-V.nig3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3702946..3713962

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG88_RS17060 (TUMSATVNIG3_33170)	aroK	3703811..3704329 (-)	519	WP_004405322.1	shikimate kinase AroK	-
QMG88_RS17065 (TUMSATVNIG3_33180)	pilQ	3704519..3706267 (-)	1749	WP_281827768.1	type IV pilus secretin PilQ family protein	Machinery gene
QMG88_RS17070 (TUMSATVNIG3_33190)	pilP	3706304..3706816 (-)	513	WP_022603536.1	pilus assembly protein PilP	Machinery gene
QMG88_RS17075 (TUMSATVNIG3_33200)	pilO	3706809..3707396 (-)	588	WP_004405328.1	type 4a pilus biogenesis protein PilO	Machinery gene
QMG88_RS17080 (TUMSATVNIG3_33210)	pilN	3707393..3707953 (-)	561	WP_004405329.1	PilN domain-containing protein	Machinery gene
QMG88_RS17085 (TUMSATVNIG3_33220)	pilM	3707946..3708962 (-)	1017	WP_004405331.1	type IV pilus assembly protein PilM	Machinery gene
QMG88_RS17090 (TUMSATVNIG3_33230)	-	3709108..3711606 (+)	2499	WP_281827772.1	PBP1A family penicillin-binding protein	-
QMG88_RS17095 (TUMSATVNIG3_33240)	oxyR	3711661..3712542 (-)	882	WP_004405335.1	DNA-binding transcriptional regulator OxyR	-
QMG88_RS17100 (TUMSATVNIG3_33250)	-	3712721..3713452 (+)	732	WP_004405337.1	glutathione peroxidase	-

Sequence

Protein

• Length: 338 a.a.
• Molecular weight: 37082.32 Da
• Isoelectric Point: 6.4160

>NTDB_id=99393 QMG88_RS17085 WP_004405331.1 3707946..3708962(-) (pilM) [Vibrio nigripulchritudo strain TUMSAT-V.nig3]
MGRSLVVGIDFGHHSIKAVAMKPIGELMQLVGYNELTVPEDIFSENHTLDYQKIVKKLKELKKGLPLFSQQVAVSVPDKA
VISKVLQIEQDMDGREQEFAVHQAFGQQSPIPLEELSLDFFEVDQKVTTRSTTSTFQVYATRKEVVDSRVAALTKAGLKP
LTVDVHANSLLKVWRLASQVHPERRQWMLVDIGLNQTSLCTVAAGRTPFYKEVPFGTQNVAQSQEVSESISLSSDSLTQG
FVRELGEKLQRHISLYNSVNPQQNVDGIWLSGGGANLVGIADMLSSELSLEVAQLNPFGLVENGTKKSIKQLSDSAAYGV
AMGLAISGVEWLKGNHHA

Nucleotide

• Length: 1017 bp

>NTDB_id=99393 QMG88_RS17085 WP_004405331.1 3707946..3708962(-) (pilM) [Vibrio nigripulchritudo strain TUMSAT-V.nig3]
ATGGGTAGATCTTTAGTAGTTGGCATCGATTTCGGTCATCACAGTATCAAAGCTGTCGCCATGAAACCCATTGGCGAGCT
AATGCAACTTGTTGGTTATAATGAGCTTACTGTACCCGAAGATATTTTCTCTGAAAACCATACGCTCGATTATCAGAAGA
TTGTAAAGAAACTCAAAGAACTTAAAAAGGGCTTGCCTCTTTTTAGTCAACAAGTCGCAGTTTCCGTACCAGACAAGGCT
GTTATCAGCAAAGTTCTGCAAATTGAGCAGGATATGGATGGCAGAGAACAAGAGTTTGCCGTTCATCAGGCTTTTGGTCA
GCAGTCTCCCATTCCACTGGAAGAGCTGAGTTTAGACTTCTTCGAAGTGGATCAAAAAGTCACCACGCGCAGCACCACAT
CTACCTTTCAGGTTTATGCCACTCGCAAAGAAGTGGTTGATTCGCGAGTTGCGGCATTAACTAAGGCTGGGTTAAAACCG
TTGACGGTTGATGTACACGCCAACAGCCTGCTAAAAGTCTGGCGTCTTGCCAGCCAGGTTCATCCGGAACGCCGACAATG
GATGCTGGTGGATATCGGATTGAATCAAACGTCTTTATGCACGGTTGCCGCGGGAAGAACCCCTTTTTATAAAGAAGTGC
CTTTTGGTACCCAGAACGTGGCTCAGTCACAAGAAGTTTCTGAATCCATCTCGTTAAGCAGCGACTCTCTTACGCAAGGG
TTTGTCCGAGAGCTAGGCGAAAAGCTTCAGCGCCACATTAGCCTTTATAACTCCGTTAATCCTCAGCAAAACGTAGACGG
AATCTGGCTTAGTGGCGGCGGTGCCAATCTGGTTGGTATTGCGGACATGCTGAGCAGCGAGCTTTCCCTTGAAGTGGCAC
AGCTGAACCCGTTTGGTTTAGTGGAAAACGGCACTAAGAAGTCGATAAAGCAATTGTCTGATTCTGCCGCGTATGGTGTG
GCCATGGGGCTGGCAATCAGTGGAGTAGAATGGCTGAAAGGAAATCACCATGCATAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (8-223)

• Type IV pilus assembly protein PilM; (PilM_2) (239-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio cholerae strain A1552	54.706	100	0.55
pilM	Vibrio campbellii strain DS40M4	44.97	100	0.45