Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EQB46_RS07855 Genome accession   NZ_LR129843
Coordinates   1453508..1454185 (-) Length   225 a.a.
NCBI ID   WP_000548991.1    Uniprot ID   A0A501PEF7
Organism   Streptococcus pneumoniae strain 180-2 isolate 180-2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1448508..1459185
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQB46_RS07825 - 1448669..1449298 (-) 630 WP_000762092.1 NAD(P)-dependent oxidoreductase -
  EQB46_RS07830 - 1449537..1449911 (+) 375 WP_001252470.1 hypothetical protein -
  EQB46_RS07840 - 1450168..1450491 (+) 324 WP_000422779.1 MazG-like protein -
  EQB46_RS07845 thrS 1450549..1452492 (+) 1944 WP_000608354.1 threonine--tRNA ligase -
  EQB46_RS07850 - 1452541..1453515 (-) 975 WP_000887971.1 sensor histidine kinase -
  EQB46_RS07855 braR 1453508..1454185 (-) 678 WP_000548991.1 response regulator transcription factor Regulator
  EQB46_RS07860 - 1454341..1455414 (+) 1074 WP_001273823.1 DUF2974 domain-containing protein -
  EQB46_RS07865 - 1455505..1455807 (-) 303 WP_000281609.1 hypothetical protein -
  EQB46_RS07870 - 1455875..1456312 (-) 438 WP_001166786.1 Rrf2 family transcriptional regulator -
  EQB46_RS07875 - 1456388..1457229 (-) 842 Protein_1501 metallophosphoesterase family protein -
  EQB46_RS07880 - 1457341..1457991 (+) 651 WP_000188505.1 metal-dependent transcriptional regulator -
  EQB46_RS07890 - 1458170..1458847 (+) 678 WP_000260189.1 nicotinamide mononucleotide transporter -

Sequence

Protein


Download         Length: 225 a.a.        Molecular weight: 25936.11 Da        Isoelectric Point: 5.1362

>NTDB_id=993906 EQB46_RS07855 WP_000548991.1 1453508..1454185(-) (braR) [Streptococcus pneumoniae strain 180-2 isolate 180-2]
MHKILLVEDDQVIRQQVGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=993906 EQB46_RS07855 WP_000548991.1 1453508..1454185(-) (braR) [Streptococcus pneumoniae strain 180-2 isolate 180-2]
ATGCACAAGATTTTATTAGTGGAAGATGATCAGGTCATTCGTCAACAGGTTGGGAAAATGCTCTCTGAATGGGGATTTGA
AGTGGTCCTGGTAGAAGACTTTATGGAAGTTTTGAGTCTATTTGTTCAGTCGGAACCTCATCTGGTCCTCATGGATATTG
GTTTGCCCTTGTTTAATGGTTATCACTGGTGTCAGGAAATCCGCAAGATTTCCAAGGTACCTATCATGTTTCTTTCTTCG
AGAGACCAGGCTATGGATATTGTCATGGCAATCAATATGGGAGCGGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
TCTTTTAGCCAAGGTTCAGGGCTTGTTGCGTCGTTCCTATGAGTTTGGGCGTGATGAGAGTTTGCTGGAATATGCTGGTG
TTATCCTCAATACCAAATCCATGGATTTACATTATCAAGGGCAAGTCTTGAATTTGACCAAGAATGAATTCCAGATTTTA
CGCGTGTTGTTTGAGCATGCAGGCAACATCGTAGCACGTGACGACCTGATGCGAGAACTTTGGAACAGTGACTTTTTCAT
TGATGATAATACCCTCTCTGTCAATGTGGCTCGTTTGCGTAAAAAGTTGGAGGAGCAGGGATTGGTAGGATTTATCGAGA
CCAAGAAAGGAATAGGGTACGGATTGAAGCATGCTTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A501PEF7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

49.083

96.889

0.476
  vicR Streptococcus mutans UA159

35.319

100

0.369