Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EQB41_RS08290 Genome accession   NZ_LR129840
Coordinates   1538341..1539018 (-) Length   225 a.a.
NCBI ID   WP_000548959.1    Uniprot ID   Q9S1K2
Organism   Streptococcus pneumoniae strain 4496 isolate 4496     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1533341..1544018
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQB41_RS08250 - 1533502..1534131 (-) 630 WP_000762090.1 NAD(P)-dependent oxidoreductase -
  EQB41_RS12770 - 1534370..1534744 (+) 375 Protein_1571 hypothetical protein -
  EQB41_RS08270 - 1535001..1535141 (+) 141 WP_000422775.1 MazG-like protein -
  EQB41_RS08275 - 1535148..1535324 (+) 177 WP_000166031.1 MazG-like protein -
  EQB41_RS08280 thrS 1535382..1537325 (+) 1944 WP_000608349.1 threonine--tRNA ligase -
  EQB41_RS08285 - 1537374..1538348 (-) 975 WP_000887953.1 HAMP domain-containing histidine kinase -
  EQB41_RS08290 braR 1538341..1539018 (-) 678 WP_000548959.1 response regulator transcription factor Regulator
  EQB41_RS08295 - 1539174..1540247 (+) 1074 WP_001273823.1 DUF2974 domain-containing protein -
  EQB41_RS08300 - 1540338..1540640 (-) 303 WP_000281608.1 hypothetical protein -
  EQB41_RS08305 - 1540708..1541145 (-) 438 WP_001166786.1 Rrf2 family transcriptional regulator -
  EQB41_RS08310 - 1541221..1542063 (-) 843 WP_000160934.1 metallophosphoesterase family protein -
  EQB41_RS08315 - 1542175..1542825 (+) 651 WP_000188505.1 metal-dependent transcriptional regulator -
  EQB41_RS08325 - 1543002..1543649 (+) 648 WP_000260187.1 nicotinamide mononucleotide transporter -

Sequence

Protein


Download         Length: 225 a.a.        Molecular weight: 25964.16 Da        Isoelectric Point: 5.1362

>NTDB_id=993675 EQB41_RS08290 WP_000548959.1 1538341..1539018(-) (braR) [Streptococcus pneumoniae strain 4496 isolate 4496]
MHKILLIEDDQVIRQQIGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=993675 EQB41_RS08290 WP_000548959.1 1538341..1539018(-) (braR) [Streptococcus pneumoniae strain 4496 isolate 4496]
ATGCACAAGATTTTATTAATAGAAGATGATCAGGTCATTCGTCAACAGATTGGGAAAATGCTCTCTGAATGGGGATTTGA
AGTGGTCCTGGTAGAAGACTTTATGGAAGTTTTGAGTCTATTTGTTCAGTCGGAACCTCATCTGGTCCTCATGGATATTG
GTTTGCCCTTGTTTAATGGTTATCACTGGTGTCAGGAAATCCGCAAGATTTCCAAGGTACCTATCATGTTTCTTTCTTCG
AGAGACCAGGCTATGGATATTGTCATGGCAATCAATATGGGGGCGGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
TCTTTTAGCTAAGGTTCAGGGCTTGTTGCGTCGTTCCTATGAGTTTGGGCGTGATGAGAGTTTGCTGGAATATGCTGGTG
TTATCCTCAATACCAAATCCATGGATTTACATTATCAAGGGCAAGTCTTGAATTTGACCAAGAATGAATTCCAGATTTTA
CGCGTGTTATTTGAGCATGCAGGCAACATCGTAGCACGTGACGACCTGATGCGGGAACTTTGGAACAGTGACTTTTTCAT
TGATGATAATACCCTCTCTGTCAATGTGGCTCGTTTGCGTAAAAAGTTGGAGGAGCAGGGATTGGTAGGATTTATCGAGA
CCAAGAAAGGAATAGGGTACGGATTGAAGCATGCTTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9S1K2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.624

96.889

0.471
  vicR Streptococcus mutans UA159

35.319

100

0.369

Multiple sequence alignment