Detailed information NTG0993467

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: AAHT65_RS20205
• Genome accession: NZ_CP154443
• Coordinates: 4012247..4014580 (-)
• Length: 777 a.a.
• NCBI ID: WP_343310721.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain SW
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4007247..4019580

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHT65_RS20170 (AAHT65_20165)	-	4007578..4007916 (-)	339	WP_004429433.1	YqxA family protein	-
AAHT65_RS20175 (AAHT65_20170)	spoIIP	4007935..4009143 (-)	1209	WP_010789251.1	stage II sporulation protein P	-
AAHT65_RS20180 (AAHT65_20175)	gpr	4009210..4010313 (-)	1104	WP_327853718.1	GPR endopeptidase	-
AAHT65_RS20185 (AAHT65_20180)	rpsT	4010518..4010784 (+)	267	WP_003325396.1	30S ribosomal protein S20	-
AAHT65_RS20190 (AAHT65_20185)	holA	4010799..4011842 (-)	1044	WP_010789253.1	DNA polymerase III subunit delta	-
AAHT65_RS20195 (AAHT65_20190)	-	4011882..4012031 (-)	150	WP_181279838.1	hypothetical protein	-
AAHT65_RS20200 (AAHT65_20195)	-	4012072..4012206 (+)	135	WP_064505211.1	YqzM family protein	-
AAHT65_RS20205 (AAHT65_20200)	comEC	4012247..4014580 (-)	2334	WP_343310721.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AAHT65_RS20210 (AAHT65_20205)	-	4014587..4015156 (-)	570	WP_003325392.1	ComE operon protein 2	-
AAHT65_RS20215 (AAHT65_20210)	comEA	4015224..4015847 (-)	624	WP_343310722.1	helix-hairpin-helix domain-containing protein	Machinery gene
AAHT65_RS20220 (AAHT65_20215)	comER	4015931..4016749 (+)	819	WP_343310723.1	late competence protein ComER	-
AAHT65_RS20225 (AAHT65_20220)	-	4016819..4017559 (-)	741	WP_003325388.1	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	-
AAHT65_RS20230 (AAHT65_20225)	rsfS	4017556..4017912 (-)	357	WP_003325387.1	ribosome silencing factor	-
AAHT65_RS20235 (AAHT65_20230)	yqeK	4017929..4018489 (-)	561	WP_088117608.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AAHT65_RS20240 (AAHT65_20235)	-	4018479..4019048 (-)	570	WP_003325385.1	nicotinate-nucleotide adenylyltransferase	-
AAHT65_RS20245 (AAHT65_20240)	yhbY	4019060..4019350 (-)	291	WP_003325384.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 777 a.a.
• Molecular weight: 87052.96 Da
• Isoelectric Point: 9.0985

>NTDB_id=993467 AAHT65_RS20205 WP_343310721.1 4012247..4014580(-) (comEC) [Bacillus atrophaeus strain SW]
MKNTRLLLPLAAASATAGIAAASFFSALLIFVISLFFVYIKTKQLSLVFVSLSAFTIYFFLTSVIDSHNVSSYDIGTYKL
RAVIQEIPKIDGDRMSMVVRTPDGEKWAASYKMESLAEKETLSQIEPGTACTFTGSLEKPKNATVPGTFDYKQYLYSQHI
HWNYSITAIQNCSTADGIQYRLLSVRKSLISFVNDHVPESSAGIVQALILGDRFYLMDDVLEAYQKLGVVHLLAISGLHV
GIVTAGIFYVLIRIGITREKAAILLLLFLPVYTILTGAAPSVMRAALMSGLYFIGSLWGKRMNPSIVICLSYLILLLFNP
YHLFQIGFQLSFAVSFSLILSSSIFKKLQSGGLVQIAMVSLIAQLGSLPILIYYFQQFSLISIPMNIIMVPFYTMFVMPF
SMIGFLLLSLSEPVGEYLFYWFDYIMRWSDKLIKYAADIEQFTVIAARPNAFVLFVLIGSIVVLLTAMEKSALYQRLLSV
LLFIAMLFLVVIFPRLDPEGEVDMLDIGQGDSMFISAPYQRGHVMIDTGGILSYLTEPWREKRHPFSLSEKVLIPFLTAK
GIKQLDALILTHADQDHIGEAKVLIKRHKVKQLIVPKGFVSEPNDKKVLRTAQQEGIRITEVKRGDTFQIKDLQFRVLSP
ETPDPNSKNNSSLVLWMKTGHLSWVLTGDLEKEGEQEIMKAFPDLKADILKAGHHGSKGSTGEEFVRHLKPKAAIISAGE
NNRYHHPHQEVLDILKAHSVRIFRTDQSGTIQYRFKSGFGTFSVYPPYDTTGMTETN

Nucleotide

• Length: 2334 bp

>NTDB_id=993467 AAHT65_RS20205 WP_343310721.1 4012247..4014580(-) (comEC) [Bacillus atrophaeus strain SW]
ATGAAGAACACACGCCTTCTTTTGCCTCTGGCGGCAGCATCAGCAACGGCTGGCATAGCTGCTGCCTCCTTTTTCTCCGC
ACTTCTCATATTCGTTATATCACTCTTCTTTGTTTATATCAAAACAAAACAGCTCTCACTCGTTTTTGTTAGTTTATCGG
CTTTTACGATCTATTTTTTCTTAACCTCTGTTATCGATTCTCATAATGTATCGTCCTATGACATCGGCACCTATAAGCTT
CGGGCGGTGATTCAGGAAATTCCAAAGATTGACGGAGACCGTATGTCCATGGTAGTTCGAACGCCGGATGGGGAAAAGTG
GGCTGCATCATATAAAATGGAGTCGCTTGCTGAAAAGGAAACACTTTCACAGATAGAGCCAGGGACGGCTTGTACGTTTA
CCGGTTCTTTAGAAAAGCCGAAAAACGCAACGGTTCCCGGCACTTTCGATTATAAACAGTATCTGTACAGCCAGCATATT
CACTGGAATTACTCGATAACAGCAATCCAAAATTGCAGCACGGCAGATGGAATACAGTATAGGCTTTTAAGCGTGAGAAA
GTCTCTTATTTCATTTGTGAATGACCATGTTCCGGAATCCTCAGCAGGCATCGTGCAGGCGCTCATCCTGGGTGACAGAT
TTTATCTTATGGACGATGTGCTGGAAGCGTATCAAAAGCTCGGAGTTGTCCATCTGCTTGCGATTTCAGGGCTCCATGTA
GGTATTGTGACAGCTGGTATATTCTATGTGCTCATTCGAATTGGGATAACGAGAGAGAAGGCTGCCATTCTGCTGCTGTT
GTTTTTGCCTGTTTATACAATTTTAACCGGAGCGGCTCCGTCTGTGATGCGCGCAGCTCTTATGTCAGGGCTTTATTTTA
TCGGCAGTTTGTGGGGAAAGCGTATGAACCCTTCAATAGTGATCTGTCTTTCTTATTTAATTCTCCTTTTGTTTAATCCG
TATCATCTTTTTCAAATAGGGTTTCAACTCTCATTTGCCGTAAGTTTCTCTTTAATACTTTCTTCCTCTATTTTTAAGAA
ACTTCAAAGCGGGGGACTCGTGCAGATCGCCATGGTGTCACTCATCGCTCAGCTTGGATCGCTTCCCATCCTTATCTATT
ATTTTCAGCAGTTTTCTCTTATCAGTATACCGATGAATATCATTATGGTGCCTTTTTATACGATGTTTGTCATGCCGTTT
TCTATGATAGGTTTTCTTTTGTTAAGTTTGTCTGAGCCGGTTGGTGAGTACCTGTTTTATTGGTTTGATTACATCATGCG
TTGGAGTGACAAGCTGATAAAGTATGCTGCAGACATTGAGCAATTCACAGTGATTGCAGCCCGTCCTAATGCGTTTGTCT
TGTTTGTGCTGATTGGATCTATCGTTGTTTTGCTGACAGCCATGGAGAAATCCGCCCTTTACCAAAGACTTCTGTCTGTG
CTGCTCTTTATCGCAATGCTTTTTCTGGTGGTTATTTTTCCTCGCCTGGACCCCGAGGGAGAAGTGGATATGCTTGATAT
CGGTCAGGGAGACAGCATGTTTATCAGCGCTCCGTATCAGCGCGGCCATGTGATGATAGACACTGGAGGAATCCTTTCAT
ACTTAACAGAGCCATGGAGGGAAAAACGGCATCCTTTTTCGCTTAGCGAAAAGGTGCTCATTCCTTTCTTAACAGCAAAA
GGCATTAAACAGCTTGATGCCTTAATTTTGACTCATGCGGACCAAGACCATATAGGGGAAGCAAAGGTTCTGATCAAGCG
GCATAAAGTCAAACAGCTCATTGTGCCGAAAGGATTTGTTTCTGAACCGAATGATAAAAAAGTGCTGCGGACCGCACAGC
AAGAGGGAATTCGCATTACAGAGGTTAAACGAGGCGACACCTTTCAGATAAAGGATTTACAGTTTCGCGTACTGTCGCCT
GAGACTCCCGACCCGAACAGCAAAAATAACTCTTCTCTCGTGCTATGGATGAAAACAGGTCATCTCAGCTGGGTGCTGAC
AGGCGATCTCGAAAAGGAAGGGGAACAGGAGATCATGAAAGCTTTTCCGGATCTAAAAGCGGATATTTTAAAGGCGGGGC
ACCATGGCAGTAAAGGATCTACCGGAGAAGAGTTTGTCCGCCACCTGAAACCAAAGGCGGCAATTATTTCTGCCGGTGAG
AATAATCGGTATCACCATCCCCATCAGGAAGTCCTTGATATATTGAAAGCTCATTCTGTCCGCATTTTCCGCACTGATCA
AAGCGGGACGATCCAATACAGATTTAAAAGCGGGTTTGGAACCTTTTCTGTCTATCCTCCATATGATACAACAGGTATGA
CGGAGACGAACTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (24-169)

• Competence protein (Competence) (208-467)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	65.508	100	0.655