Detailed information NTG0993412

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AAHT65_RS04580
• Genome accession: NZ_CP154443
• Coordinates: 887585..888727 (+)
• Length: 380 a.a.
• NCBI ID: WP_106360166.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain SW
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 882585..893727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHT65_RS04560 (AAHT65_04560)	-	883050..883751 (+)	702	WP_343311503.1	bacteriocin biosynthesis protein AlbG	-
AAHT65_RS04565 (AAHT65_04565)	-	883758..885134 (-)	1377	WP_343311037.1	YncE family protein	-
AAHT65_RS04570 (AAHT65_04570)	-	885175..886536 (-)	1362	WP_343311038.1	YncE family protein	-
AAHT65_RS04575 (AAHT65_04575)	-	886820..887374 (+)	555	WP_343311039.1	YdhK family protein	-
AAHT65_RS04580 (AAHT65_04580)	rapF	887585..888727 (+)	1143	WP_106360166.1	tetratricopeptide repeat protein	Regulator
AAHT65_RS04585 (AAHT65_04585)	phrF	888711..888830 (+)	120	WP_061572214.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AAHT65_RS04590 (AAHT65_04590)	-	889084..889563 (+)	480	WP_343311040.1	hypothetical protein	-
AAHT65_RS04595 (AAHT65_04595)	-	889712..890500 (+)	789	WP_088118184.1	hypothetical protein	-
AAHT65_RS04600 (AAHT65_04600)	-	890487..891161 (+)	675	WP_035175329.1	hypothetical protein	-
AAHT65_RS04605 (AAHT65_04605)	-	891171..891968 (+)	798	WP_343311504.1	hypothetical protein	-
AAHT65_RS04610 (AAHT65_04610)	-	891971..892618 (+)	648	WP_343311041.1	ABC transporter ATP-binding protein	-
AAHT65_RS04615 (AAHT65_04615)	-	892611..893168 (+)	558	WP_343311042.1	hypothetical protein	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 45604.18 Da
• Isoelectric Point: 5.5350

>NTDB_id=993412 AAHT65_RS04580 WP_106360166.1 887585..888727(+) (rapF) [Bacillus atrophaeus strain SW]
MTGVISSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDIHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPRL
SDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSM
DYARQAYEIYKEHTAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYTMAESEKQPQLMGRTLYNIGLCKNSQDQYESA
ITYFKRAISVFEEANILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGIAYSKEAGDIIYLSEFEFLKSLYSSGPDEEAIQ
KFFDFLESKMMYADLEDFALDVAKYYHGRENFQKASAYFLKVERVRQLIQGGVKLYEIEV

Nucleotide

• Length: 1143 bp

>NTDB_id=993412 AAHT65_RS04580 WP_106360166.1 887585..888727(+) (rapF) [Bacillus atrophaeus strain SW]
GTGACAGGCGTCATATCTTCTTCCATTGGAGAAAAGATTAATGAATGGTACATGTACATACGCCGATTCAGCATACCGGA
TGCGGAATATTTACGAAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGACCAGGATATTCATTTGTATTATTCAC
TGATGGAATTCCGGCACAATCTGATGCTTGAGTATCTTGAACCGTTAGAAAAAATGCGGATAGAGGAACAGCCGCGACTG
TCCGATTTACTGCTTGAAATCGATAAAAAACAGGCTCGTTTAACCGGACTGCTTGAATACTATTTTAATTTCTTCAGAGG
TATGTATGAGCTGGACCAGCGGGAGTACTTGTCTGCTATTAAATTTTTCAAAAAAGCCGAAAGTAAGCTGATTTTTGTAA
AGGATCGAATAGAAAAAGCTGAGTTTTTCTTTAAAATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCCATG
GACTATGCACGGCAGGCATATGAAATATACAAAGAGCACACGGCATATAATATTAGATTGCTTCAATGCCATTCTTTGTT
TGCTACCAATTTCTTAGATCTCAAGCAATATGAGGACGCCATATCACATTTCAAAAAAGCTTATACAATGGCAGAATCCG
AAAAACAGCCCCAATTAATGGGAAGAACGCTGTATAACATTGGGCTTTGCAAAAACAGCCAAGACCAGTATGAGTCAGCA
ATCACATATTTCAAAAGAGCCATATCTGTTTTTGAAGAAGCTAATATTCTTCCTTCTCTGCCTCAAGCTTATTTTTTGAT
TACACAAATTCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAAGGAATTGCTTATTCTAAAGAGG
CCGGAGATATCATTTACTTATCGGAGTTTGAATTTTTGAAATCTTTATACTCATCTGGCCCGGATGAAGAGGCAATTCAG
AAATTCTTCGATTTTCTCGAAAGTAAAATGATGTATGCTGATCTTGAAGATTTTGCGCTTGATGTGGCAAAATATTATCA
TGGACGTGAAAATTTCCAAAAAGCTTCCGCGTATTTTCTGAAGGTGGAACGAGTAAGGCAGCTTATTCAAGGAGGAGTGA
AGTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (222-289)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (131-206)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	93.701	100	0.939
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	100	0.574