Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   AAHT66_RS21555 Genome accession   NZ_CP154441
Coordinates   4147653..4148444 (-) Length   263 a.a.
NCBI ID   WP_087992612.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain XN303     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 4142653..4153444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT66_RS21510 (AAHT66_21510) - 4142812..4143672 (-) 861 WP_202328254.1 alpha/beta fold hydrolase -
  AAHT66_RS21515 (AAHT66_21515) - 4143659..4143991 (-) 333 WP_202328255.1 SdpI family protein -
  AAHT66_RS21520 (AAHT66_21520) - 4144076..4144594 (-) 519 WP_202328256.1 SH3 domain-containing protein -
  AAHT66_RS21525 (AAHT66_21525) - 4144786..4144998 (+) 213 WP_087992617.1 helix-turn-helix transcriptional regulator -
  AAHT66_RS21530 (AAHT66_21530) - 4145000..4145383 (+) 384 WP_087992616.1 hypothetical protein -
  AAHT66_RS21535 (AAHT66_21535) - 4145415..4145684 (-) 270 WP_010330866.1 YfhJ family protein -
  AAHT66_RS21540 (AAHT66_21540) - 4145809..4145961 (+) 153 WP_010330867.1 small, acid-soluble spore protein K -
  AAHT66_RS21545 (AAHT66_21545) - 4145994..4147187 (-) 1194 WP_253268956.1 MFS transporter -
  AAHT66_RS21550 (AAHT66_21550) - 4147325..4147645 (-) 321 WP_087992613.1 YfhH family protein -
  AAHT66_RS21555 (AAHT66_21555) recX 4147653..4148444 (-) 792 WP_087992612.1 recombination regulator RecX Regulator
  AAHT66_RS21560 (AAHT66_21560) - 4148533..4149444 (+) 912 WP_333516685.1 TIGR01777 family oxidoreductase -
  AAHT66_RS21565 (AAHT66_21565) - 4149498..4149608 (+) 111 WP_003223230.1 YfhE family protein -
  AAHT66_RS21570 (AAHT66_21570) - 4149675..4149866 (+) 192 WP_087992610.1 YfhD family protein -
  AAHT66_RS21575 (AAHT66_21575) - 4149905..4150489 (-) 585 WP_087992609.1 nitroreductase family protein -
  AAHT66_RS21580 (AAHT66_21580) - 4150576..4151457 (-) 882 WP_333516686.1 PhzF family phenazine biosynthesis isomerase -
  AAHT66_RS21585 (AAHT66_21585) - 4151568..4152599 (-) 1032 WP_202328259.1 FecCD family ABC transporter permease -

Sequence


Protein


Download         Length: 263 a.a.        Molecular weight: 30814.06 Da        Isoelectric Point: 7.0008

>NTDB_id=993394 AAHT66_RS21555 WP_087992612.1 4147653..4148444(-) (recX) [Bacillus inaquosorum strain XN303]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSAPAIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRFDGSYESAMK
VKQFLFRKGFSLDLIEKFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=993394 AAHT66_RS21555 WP_087992612.1 4147653..4148444(-) (recX) [Bacillus inaquosorum strain XN303]
ATGCCATTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGAAAAATACGCCTT
CAGTGTGGACGCGGACGTGCTCGTGAAATTTGAGCTCAAAAAGGGAAAAGAGCTTGATGACCTTGATATCATTGAGATTC
AATACGGTGATGAAGTAAAAAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTACCGAATGAGGTCAACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCAGCGCCTGCAATTGCGGAAGTCATCCATAAGCTCAACGACTATAAGTACCT
AAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGGATCGACGACGATACAATTAAGGAGGCATTAAGTTCCTTTTCCTTTGAAGATCAGACGAGAGAA
GCAGTGAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTCAAACAGCGCGCTCAGATGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTCATCAGCGCTGCGCTAGAGCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCCGAAAAAGCGTTTAGAAAATACCGCTTTGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGAAATTTCTGCAAGAAGAGGAGTAG

Domains


Predicted by InterproScan.

(84-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

96.198

100

0.962


Multiple sequence alignment