Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   AAHT66_RS08645 Genome accession   NZ_CP154441
Coordinates   1671783..1672427 (+) Length   214 a.a.
NCBI ID   WP_202328144.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain XN303     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1666783..1677427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT66_RS08615 (AAHT66_08615) - 1667211..1667576 (-) 366 WP_087993278.1 hypothetical protein -
  AAHT66_RS08620 (AAHT66_08620) - 1667609..1667746 (+) 138 WP_176365307.1 hypothetical protein -
  AAHT66_RS08625 (AAHT66_08625) degQ 1668036..1668176 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  AAHT66_RS08630 (AAHT66_08630) - 1668361..1669221 (+) 861 WP_087993340.1 polyprenyl synthetase family protein -
  AAHT66_RS08635 (AAHT66_08635) comX 1669236..1669397 (+) 162 WP_003241045.1 competence pheromone ComX -
  AAHT66_RS08640 (AAHT66_08640) comP 1669405..1671702 (+) 2298 WP_202328143.1 histidine kinase Regulator
  AAHT66_RS08645 (AAHT66_08645) comA 1671783..1672427 (+) 645 WP_202328144.1 two-component system response regulator ComA Regulator
  AAHT66_RS08650 (AAHT66_08650) - 1672446..1672826 (+) 381 WP_253268529.1 hotdog fold thioesterase -
  AAHT66_RS08655 (AAHT66_08655) mnhG 1672866..1673240 (-) 375 WP_087993405.1 monovalent cation/H(+) antiporter subunit G -
  AAHT66_RS08660 (AAHT66_08660) - 1673224..1673508 (-) 285 WP_087993404.1 Na(+)/H(+) antiporter subunit F1 -
  AAHT66_RS08665 (AAHT66_08665) - 1673508..1673984 (-) 477 WP_289347983.1 Na+/H+ antiporter subunit E -
  AAHT66_RS08670 (AAHT66_08670) - 1673990..1675471 (-) 1482 WP_289347982.1 Na+/H+ antiporter subunit D -
  AAHT66_RS08675 (AAHT66_08675) - 1675464..1675805 (-) 342 WP_010329900.1 Na(+)/H(+) antiporter subunit C -
  AAHT66_RS08680 (AAHT66_08680) - 1675805..1676236 (-) 432 WP_148963957.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24142.54 Da        Isoelectric Point: 4.6857

>NTDB_id=993345 AAHT66_RS08645 WP_202328144.1 1671783..1672427(+) (comA) [Bacillus inaquosorum strain XN303]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEINGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=993345 AAHT66_RS08645 WP_202328144.1 1671783..1672427(+) (comA) [Bacillus inaquosorum strain XN303]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATCT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAACAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATTTAGGCGGCGAGATCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTACGAGGTTGAGGATTATTTTGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCCAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGGTTTACAAACCAAGAAATCGCAGATGCGCTTCATTTGAGCAAGCGGTCCATCGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCCCGAACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

99.533

100

0.995

Multiple sequence alignment