Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AAHT66_RS01055 Genome accession   NZ_CP154441
Coordinates   186313..187263 (-) Length   316 a.a.
NCBI ID   WP_087993035.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain XN303     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 181313..192263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT66_RS01035 (AAHT66_01035) - 182183..183601 (+) 1419 WP_087993031.1 MDR family MFS transporter -
  AAHT66_RS01040 (AAHT66_01040) - 183643..184599 (-) 957 WP_087993032.1 siderophore ABC transporter substrate-binding protein -
  AAHT66_RS01045 (AAHT66_01045) yclP 184621..185379 (-) 759 WP_087993033.1 petrobactin ABC transporter ATP-binding protein YclP -
  AAHT66_RS01050 (AAHT66_01050) yclO 185373..186320 (-) 948 WP_333516777.1 petrobactin ABC transporter permease YclO -
  AAHT66_RS01055 (AAHT66_01055) ceuB 186313..187263 (-) 951 WP_087993035.1 petrobactin ABC transporter permease YclN Machinery gene
  AAHT66_RS01060 (AAHT66_01060) - 187650..189014 (+) 1365 WP_087993036.1 aspartate kinase -
  AAHT66_RS01065 (AAHT66_01065) - 189165..189278 (+) 114 WP_039075856.1 YjcZ family sporulation protein -
  AAHT66_RS01070 (AAHT66_01070) - 189415..189510 (+) 96 WP_087993037.1 YjcZ family sporulation protein -
  AAHT66_RS01075 (AAHT66_01075) phrC 189610..189732 (-) 123 WP_087993038.1 phosphatase RapC inhibitor PhrC Regulator
  AAHT66_RS01080 (AAHT66_01080) rapC 189716..190864 (-) 1149 WP_087993039.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34926.35 Da        Isoelectric Point: 9.9364

>NTDB_id=993318 AAHT66_RS01055 WP_087993035.1 186313..187263(-) (ceuB) [Bacillus inaquosorum strain XN303]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIIIAGLSMSICGLIMQQITRNKFVSPTTA
GTVDWARLGILISLLLFTSASPLIKMLIAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYLYADKFTVAGMGESFSVNLGLKYKRVVNIGLMIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=993318 AAHT66_RS01055 WP_087993035.1 186313..187263(-) (ceuB) [Bacillus inaquosorum strain XN303]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTTGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATCATTA
TCGCGGGTTTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACAACCGCG
GGCACAGTGGATTGGGCGAGGCTCGGCATTTTAATTTCTTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GATCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTTGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATT
CAGAATGTGTCATCATGGCTTCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATTTGTATGCGGATAAATTTACAGTGGCCGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAGCGGGTTGTGAACATCGGGCTCATGATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTGATTATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTAAAGAACAGCCTGCCGCACAC
GGCGCTATTGGGAGCGGTTTTTGTGCTGTTTTGCGATATATTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCTTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.165

100

0.532

Multiple sequence alignment