Detailed information NTG0099330

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QMG91_RS12765
• Genome accession: NZ_AP027049
• Coordinates: 2789909..2790913 (-)
• Length: 334 a.a.
• NCBI ID: WP_409351265.1
• Uniprot ID: -
• Organism: Vibrio nigripulchritudo strain TUMSAT-V.nig2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2784909..2795913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG91_RS12740 (TUMSATVNIG2_24800)	-	2785328..2786218 (+)	891	WP_022550018.1	carbohydrate ABC transporter permease	-
QMG91_RS12745 (TUMSATVNIG2_24810)	-	2786220..2787032 (+)	813	WP_004399400.1	carbohydrate ABC transporter permease	-
QMG91_RS12750 (TUMSATVNIG2_24820)	-	2787043..2788074 (+)	1032	WP_281826884.1	NAD(P)-dependent oxidoreductase	-
QMG91_RS12755 (TUMSATVNIG2_24830)	-	2788092..2789093 (+)	1002	WP_281826886.1	ABC transporter ATP-binding protein	-
QMG91_RS12760 (TUMSATVNIG2_24840)	-	2789103..2789894 (+)	792	WP_281826888.1	ThuA domain-containing protein	-
QMG91_RS12765 (TUMSATVNIG2_24850)	cytR	2789909..2790913 (-)	1005	WP_409351265.1	LacI family DNA-binding transcriptional regulator	Regulator
QMG91_RS12770 (TUMSATVNIG2_24860)	-	2791052..2792179 (-)	1128	WP_281826892.1	Gfo/Idh/MocA family protein	-
QMG91_RS12775 (TUMSATVNIG2_24870)	-	2792215..2792994 (-)	780	WP_281826895.1	ATP-binding cassette domain-containing protein	-
QMG91_RS12780 (TUMSATVNIG2_24880)	-	2792994..2793974 (-)	981	WP_022550011.1	ABC transporter permease	-
QMG91_RS12785 (TUMSATVNIG2_24890)	-	2794047..2795036 (-)	990	WP_281826898.1	substrate-binding domain-containing protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36157.67 Da
• Isoelectric Point: 7.0067

>NTDB_id=99330 QMG91_RS12765 WP_409351265.1 2789909..2790913(-) (cytR) [Vibrio nigripulchritudo strain TUMSAT-V.nig2]
MPTVKDVARVAGCSTATVSRALTNPDMVSEKTRKKVLHAVDVTGYSLNVAARSLRRSITNTIVVVVPDISNPYFSQVISG
IEGVAHKAGKKVLLGDAGHEPERVQSYFDLLPTNQADGIILLTAEVSKRLLHGKTHGSGFPLVMACEYFQGMQLPTVSID
NQQAAEKAMVYLLSLGHKKFGVIQGPMSNPICIDRHQGYLSSLEQAAIPSNPKWVLEGDFSFGSGYSLGRTLLSGADKPT
AIFCHNDEMAIGVMKVARELGIRVPEDLSVMGFDDIPFAEYCEPGLTTIHQPRAEIGEAAMKLLMDLIEGKEAVGHYYLN
ANLIVRNSTAVAKF

Nucleotide

• Length: 1005 bp

>NTDB_id=99330 QMG91_RS12765 WP_409351265.1 2789909..2790913(-) (cytR) [Vibrio nigripulchritudo strain TUMSAT-V.nig2]
ATACCAACAGTAAAAGATGTTGCCAGAGTTGCGGGTTGTTCAACCGCAACGGTCTCACGTGCTTTGACCAATCCAGATAT
GGTTTCTGAAAAAACACGCAAAAAAGTGCTGCATGCCGTTGATGTAACAGGGTATTCCCTTAACGTCGCAGCGCGCTCTT
TGCGGCGAAGTATCACTAACACCATTGTGGTGGTGGTGCCTGACATATCCAACCCTTACTTCTCCCAGGTGATTTCCGGC
ATTGAAGGCGTTGCCCACAAGGCGGGTAAAAAGGTGCTACTAGGGGATGCGGGTCACGAACCCGAACGAGTGCAATCCTA
TTTTGACTTGCTTCCGACCAATCAGGCTGACGGCATTATCCTTTTGACTGCGGAAGTCTCTAAACGTCTGCTGCATGGAA
AAACACACGGCAGTGGATTCCCGCTAGTCATGGCTTGTGAGTATTTTCAGGGAATGCAGTTACCGACGGTGTCCATAGAC
AACCAACAAGCGGCTGAAAAAGCGATGGTCTATCTGTTGAGTTTGGGTCATAAGAAGTTTGGTGTGATTCAGGGACCTAT
GAGCAACCCGATATGCATTGATCGCCATCAGGGCTATCTCAGCTCTCTGGAACAGGCGGCAATACCTTCCAACCCAAAAT
GGGTGCTGGAAGGGGATTTCAGTTTTGGTTCAGGCTATTCTCTTGGCAGAACCTTGTTGAGTGGAGCAGATAAACCAACC
GCCATTTTTTGCCATAACGATGAAATGGCTATCGGAGTTATGAAAGTCGCGAGAGAGCTTGGTATTCGCGTTCCAGAAGA
CCTTTCCGTCATGGGGTTCGATGACATTCCATTTGCCGAATACTGTGAACCCGGGCTGACAACCATTCATCAACCGAGAG
CAGAAATTGGGGAAGCAGCCATGAAGCTGCTGATGGATCTGATTGAAGGTAAGGAAGCGGTAGGGCATTACTACTTGAAT
GCGAATCTTATCGTTCGTAATTCTACCGCTGTTGCTAAATTCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-329)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	50.301	99.401	0.5
cytR	Vibrio parahaemolyticus RIMD 2210633	48.943	99.102	0.485