Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AAID36_RS11155 | Genome accession | NZ_CP154372 |
| Coordinates | 2268782..2269162 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii strain NCSR_106 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2263782..2274162
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAID36_RS11125 (AAID36_11130) | tadA | 2263901..2264404 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| AAID36_RS11130 (AAID36_11135) | - | 2264411..2265535 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AAID36_RS11135 (AAID36_11140) | ung | 2265532..2266245 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| AAID36_RS11140 (AAID36_11145) | - | 2266296..2266892 (-) | 597 | WP_000908449.1 | 6-carboxytetrahydropterin synthase | - |
| AAID36_RS11145 (AAID36_11150) | gspK | 2267122..2268081 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| AAID36_RS11150 (AAID36_11155) | xcpW | 2268081..2268782 (-) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AAID36_RS11155 (AAID36_11160) | xcpV | 2268782..2269162 (-) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AAID36_RS11160 (AAID36_11165) | - | 2269152..2269706 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| AAID36_RS11165 (AAID36_11170) | - | 2269716..2270324 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AAID36_RS11170 (AAID36_11175) | - | 2270362..2271135 (-) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| AAID36_RS11175 (AAID36_11180) | - | 2271153..2271494 (-) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| AAID36_RS11180 (AAID36_11185) | - | 2271506..2272486 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| AAID36_RS11185 (AAID36_11190) | kdsB | 2272498..2273259 (-) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=993107 AAID36_RS11155 WP_000836914.1 2268782..2269162(-) (xcpV) [Acinetobacter baumannii strain NCSR_106]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=993107 AAID36_RS11155 WP_000836914.1 2268782..2269162(-) (xcpV) [Acinetobacter baumannii strain NCSR_106]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |