Detailed information NTG0993106

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AAID36_RS11150
• Genome accession: NZ_CP154372
• Coordinates: 2268081..2268782 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain NCSR_106
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2263081..2273782

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAID36_RS11120 (AAID36_11125)	-	2263388..2263831 (-)	444	WP_001246675.1	SRPBCC family protein	-
AAID36_RS11125 (AAID36_11130)	tadA	2263901..2264404 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
AAID36_RS11130 (AAID36_11135)	-	2264411..2265535 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AAID36_RS11135 (AAID36_11140)	ung	2265532..2266245 (-)	714	WP_001177527.1	uracil-DNA glycosylase	-
AAID36_RS11140 (AAID36_11145)	-	2266296..2266892 (-)	597	WP_000908449.1	6-carboxytetrahydropterin synthase	-
AAID36_RS11145 (AAID36_11150)	gspK	2267122..2268081 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
AAID36_RS11150 (AAID36_11155)	xcpW	2268081..2268782 (-)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AAID36_RS11155 (AAID36_11160)	xcpV	2268782..2269162 (-)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
AAID36_RS11160 (AAID36_11165)	-	2269152..2269706 (-)	555	WP_000841373.1	type II secretion system protein	-
AAID36_RS11165 (AAID36_11170)	-	2269716..2270324 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AAID36_RS11170 (AAID36_11175)	-	2270362..2271135 (-)	774	WP_000497300.1	TatD family hydrolase	-
AAID36_RS11175 (AAID36_11180)	-	2271153..2271494 (-)	342	WP_001183027.1	PilZ domain-containing protein	-
AAID36_RS11180 (AAID36_11185)	-	2271506..2272486 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
AAID36_RS11185 (AAID36_11190)	kdsB	2272498..2273259 (-)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=993106 AAID36_RS11150 WP_000594579.1 2268081..2268782(-) (xcpW) [Acinetobacter baumannii strain NCSR_106]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=993106 AAID36_RS11150 WP_000594579.1 2268081..2268782(-) (xcpW) [Acinetobacter baumannii strain NCSR_106]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983