Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QMG46_RS09270 Genome accession   NZ_AP027042
Coordinates   2092952..2093353 (+) Length   133 a.a.
NCBI ID   WP_281852224.1    Uniprot ID   -
Organism   Dyella sp. GSA-30     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2087952..2098353
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMG46_RS09245 (DYGSA30_18350) - 2088690..2089616 (-) 927 WP_281852219.1 aspartate carbamoyltransferase catalytic subunit -
  QMG46_RS09250 (DYGSA30_18360) ruvX 2089655..2090104 (-) 450 WP_281852220.1 Holliday junction resolvase RuvX -
  QMG46_RS09255 (DYGSA30_18370) - 2090101..2090670 (-) 570 WP_281852221.1 YqgE/AlgH family protein -
  QMG46_RS09260 (DYGSA30_18380) - 2090779..2091648 (-) 870 WP_281852222.1 energy transducer TonB -
  QMG46_RS09265 (DYGSA30_18390) gshB 2091645..2092616 (-) 972 WP_281852223.1 glutathione synthase -
  QMG46_RS09270 (DYGSA30_18400) pilG 2092952..2093353 (+) 402 WP_281852224.1 response regulator Regulator
  QMG46_RS09275 (DYGSA30_18410) - 2093385..2093759 (+) 375 WP_281852225.1 response regulator -
  QMG46_RS09280 (DYGSA30_18420) - 2093768..2094307 (+) 540 WP_281852226.1 chemotaxis protein CheW -
  QMG46_RS09285 (DYGSA30_18430) - 2094437..2096470 (+) 2034 WP_281852227.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14662.07 Da        Isoelectric Point: 9.1434

>NTDB_id=99248 QMG46_RS09270 WP_281852224.1 2092952..2093353(+) (pilG) [Dyella sp. GSA-30]
MNLNVNGNGLAGLKVMVIDDSKTIRRTAETLLKKEGCDVLTAVDGFEALAKISDQRPSIIFVDIMMPRLDGYQTCALIKN
NPQFRGTPVIMLSSKDGLFDKARGRIVGAEQYLTKPFTRDELLGAIHRHVSTV

Nucleotide


Download         Length: 402 bp        

>NTDB_id=99248 QMG46_RS09270 WP_281852224.1 2092952..2093353(+) (pilG) [Dyella sp. GSA-30]
GTGAACTTGAACGTAAATGGCAATGGCCTGGCCGGTCTTAAGGTCATGGTTATCGATGACTCCAAGACGATCCGCCGTAC
GGCGGAAACCTTGTTGAAGAAGGAAGGCTGCGACGTGCTTACCGCCGTCGACGGGTTCGAGGCTTTGGCCAAGATTTCCG
ACCAGCGTCCGTCGATCATCTTCGTGGACATCATGATGCCGCGTCTCGACGGCTATCAAACCTGCGCGCTTATCAAGAAT
AATCCGCAGTTCCGCGGCACCCCGGTCATCATGCTGAGCTCGAAGGACGGGTTGTTCGACAAGGCCCGCGGCCGGATCGT
CGGCGCGGAACAGTATTTGACCAAGCCGTTCACCCGAGACGAACTGCTTGGCGCTATTCATCGACATGTCAGCACGGTTT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72

93.985

0.677
  vicR Streptococcus mutans UA159

41.88

87.97

0.368

Multiple sequence alignment