Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   ACKTXI_RS20485 Genome accession   NZ_AP035884
Coordinates   4585564..4586688 (-) Length   374 a.a.
NCBI ID   WP_006125491.1    Uniprot ID   A0ABT7DGV6
Organism   Streptomyces sp. CMC78     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4580564..4591688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKTXI_RS20460 (SCMC78_41470) cseB 4580818..4581531 (-) 714 WP_193463860.1 two-component system response regulator CseB -
  ACKTXI_RS20465 (SCMC78_41480) - 4581612..4582295 (-) 684 WP_319288156.1 hypothetical protein -
  ACKTXI_RS20470 (SCMC78_41490) - 4582424..4583095 (-) 672 WP_381764508.1 SigE family RNA polymerase sigma factor -
  ACKTXI_RS20475 (SCMC78_41500) - 4583254..4584168 (-) 915 WP_397724463.1 A/G-specific adenine glycosylase -
  ACKTXI_RS20480 (SCMC78_41510) - 4584471..4585211 (+) 741 WP_408054055.1 hypothetical protein -
  ACKTXI_RS20485 (SCMC78_41520) disA 4585564..4586688 (-) 1125 WP_006125491.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  ACKTXI_RS20490 (SCMC78_41530) radA/sms 4586769..4588190 (-) 1422 WP_319601574.1 DNA repair protein RadA Machinery gene
  ACKTXI_RS20495 (SCMC78_41540) - 4588424..4590304 (+) 1881 WP_408054056.1 BACON domain-containing protein -
  ACKTXI_RS20500 (SCMC78_41550) - 4590349..4591209 (-) 861 WP_319601435.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40412.35 Da        Isoelectric Point: 4.9406

>NTDB_id=99216 ACKTXI_RS20485 WP_006125491.1 4585564..4586688(-) (disA) [Streptomyces sp. CMC78]
MAANDRATTPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=99216 ACKTXI_RS20485 WP_006125491.1 4585564..4586688(-) (disA) [Streptomyces sp. CMC78]
GTGGCAGCCAACGACCGGGCGACGACGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GAGCGCGGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAATACCGGTGGCCTGATCGTGC
TGGGCATGGACAGAACCGTCGAGTCGATGTGTACCGGCGGATTCGTGCTGGACGTGGAGTTCACGGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGGGCGCTGATCCTGGACAAGGACATGACCAAGATCCTGCGGGCCGGGGTGCAGCTGGTCCC
GGACGCCTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCTCCAAGGCGTGCGGTTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGGGCCAACCAGGCGCTCGCGACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTGGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTGGCGCAGCGGCTTGAGATGGTGCGGCGGATCG
CGACGGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGACGGCTCCTCTCGCTCCAGCTGGACGAGCTGATCGCC
GGGGTGGAGCCGGAGCGGGAGCTGGTCGTCCGGGATTACGTCCCCGAACCGACGGCGAAACGGTCGCGCACGGTGGCCGA
GGCGCTGACCGAGCTGGACTCCCTGAGCCACACGGAGCTGCTGGAGCTGCCGGTGGTGGCGCGGGCGCTGGGCTACAGCG
GCTCGCCGGAGACACTGGACTCGGCGGTGTCGCCGCGGGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGTGGCCTCCAGAAGCTGCTGGCGGCCAGCGTGGACGATCTCCAGACGGTGGA
CGGGGTGGGCGAGGCCCGGGCGCGGAGTGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436