Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SABB155_RS05905 Genome accession   NZ_LN854556
Coordinates   1201826..1203112 (+) Length   428 a.a.
NCBI ID   WP_054190199.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BB155     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1196826..1208112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SABB155_RS05875 - 1197222..1197335 (+) 114 WP_001789890.1 hypothetical protein -
  SABB155_RS05880 (SABB155_10920) tsf 1197370..1198251 (+) 882 WP_000201387.1 translation elongation factor Ts -
  SABB155_RS05885 (SABB155_10930) pyrH 1198388..1199110 (+) 723 WP_000057330.1 UMP kinase -
  SABB155_RS05890 (SABB155_10940) frr 1199129..1199683 (+) 555 WP_001280006.1 ribosome recycling factor -
  SABB155_RS05895 (SABB155_10950) - 1200056..1200826 (+) 771 WP_000473705.1 isoprenyl transferase -
  SABB155_RS05900 (SABB155_10960) - 1200833..1201615 (+) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  SABB155_RS05905 (SABB155_10970) eeP 1201826..1203112 (+) 1287 WP_054190199.1 RIP metalloprotease RseP Regulator
  SABB155_RS05910 (SABB155_10980) - 1203132..1204835 (+) 1704 WP_054190198.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48171.64 Da        Isoelectric Point: 9.6510

>NTDB_id=992076 SABB155_RS05905 WP_054190199.1 1201826..1203112(+) (eeP) [Staphylococcus aureus strain BB155]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALNKVKDNKTTVKFERDGKIKSVELTPKKTERKLTKVSSETKYVLGFQPASERTLFKPIIFGFENFLKGSTLIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=992076 SABB155_RS05905 WP_054190199.1 1201826..1203112(+) (eeP) [Staphylococcus aureus strain BB155]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATCGTTTTTGGTGTACTAGTAACTGTTCACGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCGAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTACCTGTTGGTGGATACGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ACGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGCAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCAGGACCGTTATTTAACTTTATATTGGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGATTACAAAAAGGGGATAAAATTGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAAATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAATAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTGCTCGGATTCCAACCAGCTAGTGAACGTA
CGCTCTTCAAACCAATAATTTTTGGATTTGAAAACTTTTTGAAAGGTAGTACATTAATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTAGACTCAGT
TGTTAAAGCAGGTATCATTAGCTTAATTGGTTACACTGCGTTATTAAGTGTAAACTTAGGGATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTCGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATCGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(9-413)

(191-265)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

40.139

100

0.404

  eeP Streptococcus thermophilus LMG 18311

39.815

100

0.402