Detailed information NTG0991849

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AAHZ02_RS22015
• Genome accession: NZ_CP153701
• Coordinates: 4406229..4407029 (+)
• Length: 266 a.a.
• NCBI ID: WP_004145898.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae strain Kpn46
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4401229..4412029

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHZ02_RS21980 (AAHZ02_21935)	gspH	4401385..4401900 (+)	516	WP_004191951.1	type II secretion system minor pseudopilin GspH	-
AAHZ02_RS21985 (AAHZ02_21940)	gspI	4401897..4402262 (+)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
AAHZ02_RS21990 (AAHZ02_21945)	gspJ	4402259..4402855 (+)	597	WP_004145893.1	type II secretion system minor pseudopilin GspJ	-
AAHZ02_RS21995 (AAHZ02_21950)	gspK	4402852..4403838 (+)	987	WP_004178610.1	type II secretion system minor pseudopilin GspK	-
AAHZ02_RS22000 (AAHZ02_21955)	gspL	4403825..4405018 (+)	1194	WP_166715014.1	type II secretion system protein GspL	-
AAHZ02_RS22005 (AAHZ02_21960)	-	4405011..4405496 (+)	486	WP_004151943.1	type II secretion system protein M	-
AAHZ02_RS22010 (AAHZ02_21965)	-	4405486..4406232 (+)	747	WP_004145897.1	type II secretion system protein N	-
AAHZ02_RS22015 (AAHZ02_21970)	pilD	4406229..4407029 (+)	801	WP_004145898.1	A24 family peptidase	Machinery gene
AAHZ02_RS22020 (AAHZ02_21975)	hrpB	4407077..4409506 (-)	2430	WP_076027598.1	ATP-dependent helicase HrpB	-
AAHZ02_RS22025 (AAHZ02_21980)	thpR	4409579..4410115 (+)	537	WP_004145901.1	RNA 2',3'-cyclic phosphodiesterase	-
AAHZ02_RS22030 (AAHZ02_21985)	sfsA	4410115..4410831 (+)	717	WP_002888848.1	DNA/RNA nuclease SfsA	-
AAHZ02_RS22035 (AAHZ02_21990)	dksA	4410994..4411449 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29389.01 Da
• Isoelectric Point: 8.8894

>NTDB_id=991849 AAHZ02_RS22015 WP_004145898.1 4406229..4407029(+) (pilD) [Klebsiella pneumoniae strain Kpn46]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMV

Nucleotide

• Length: 801 bp

>NTDB_id=991849 AAHZ02_RS22015 WP_004145898.1 4406229..4407029(+) (pilD) [Klebsiella pneumoniae strain Kpn46]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTACTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGCTCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAACTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTACTGCAACGCCTGTGGACCCGGCAA
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCTGGCGGGGGTATTTTTCTCTGGCAGCAGATGGTCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.434	99.624	0.492
pilD	Vibrio campbellii strain DS40M4	46.182	100	0.477
pilD	Acinetobacter nosocomialis M2	46.008	98.872	0.455
pilD	Acinetobacter baumannii D1279779	45.247	98.872	0.447
pilD	Neisseria gonorrhoeae MS11	43.295	98.12	0.425