Detailed information NTG0991657

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AAHY93_RS21390
• Genome accession: NZ_CP153681
• Coordinates: 4317450..4318250 (+)
• Length: 266 a.a.
• NCBI ID: WP_004145898.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae strain Kpn5836
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4312450..4323250

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHY93_RS21355 (AAHY93_21310)	gspH	4312606..4313121 (+)	516	WP_004191951.1	type II secretion system minor pseudopilin GspH	-
AAHY93_RS21360 (AAHY93_21315)	gspI	4313118..4313483 (+)	366	WP_373855664.1	type II secretion system minor pseudopilin GspI	-
AAHY93_RS21365 (AAHY93_21320)	gspJ	4313480..4314076 (+)	597	WP_373855665.1	type II secretion system minor pseudopilin GspJ	-
AAHY93_RS21370 (AAHY93_21325)	gspK	4314073..4315059 (+)	987	WP_077255670.1	type II secretion system minor pseudopilin GspK	-
AAHY93_RS21375 (AAHY93_21330)	gspL	4315046..4316239 (+)	1194	WP_040164727.1	type II secretion system protein GspL	-
AAHY93_RS21380 (AAHY93_21335)	-	4316232..4316717 (+)	486	WP_004151943.1	type II secretion system protein M	-
AAHY93_RS21385 (AAHY93_21340)	-	4316707..4317453 (+)	747	WP_004145897.1	type II secretion system protein N	-
AAHY93_RS21390 (AAHY93_21345)	pilD	4317450..4318250 (+)	801	WP_004145898.1	A24 family peptidase	Machinery gene
AAHY93_RS21395 (AAHY93_21350)	hrpB	4318298..4320727 (-)	2430	WP_130969968.1	ATP-dependent helicase HrpB	-
AAHY93_RS21400 (AAHY93_21355)	thpR	4320800..4321336 (+)	537	WP_085838587.1	RNA 2',3'-cyclic phosphodiesterase	-
AAHY93_RS21405 (AAHY93_21360)	sfsA	4321336..4322049 (+)	714	WP_373855666.1	DNA/RNA nuclease SfsA	-
AAHY93_RS21410 (AAHY93_21365)	dksA	4322216..4322671 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29389.01 Da
• Isoelectric Point: 8.8894

>NTDB_id=991657 AAHY93_RS21390 WP_004145898.1 4317450..4318250(+) (pilD) [Klebsiella pneumoniae strain Kpn5836]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMV

Nucleotide

• Length: 801 bp

>NTDB_id=991657 AAHY93_RS21390 WP_004145898.1 4317450..4318250(+) (pilD) [Klebsiella pneumoniae strain Kpn5836]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTACTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGCTCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTACTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGGGTATTTTTCTCTGGCAGCAGATGGTCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.434	99.624	0.492
pilD	Vibrio campbellii strain DS40M4	46.182	100	0.477
pilD	Acinetobacter nosocomialis M2	46.008	98.872	0.455
pilD	Acinetobacter baumannii D1279779	45.247	98.872	0.447
pilD	Neisseria gonorrhoeae MS11	43.295	98.12	0.425