Detailed information NTG0991633

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AAHZ67_RS21055
• Genome accession: NZ_CP153680
• Coordinates: 4271633..4272433 (+)
• Length: 266 a.a.
• NCBI ID: WP_032414527.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae strain Kpn292
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4266633..4277433

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHZ67_RS21020 (AAHZ67_21000)	gspH	4266789..4267304 (+)	516	WP_004183045.1	type II secretion system minor pseudopilin GspH	-
AAHZ67_RS21025 (AAHZ67_21005)	gspI	4267301..4267666 (+)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
AAHZ67_RS21030 (AAHZ67_21010)	gspJ	4267663..4268259 (+)	597	WP_064146108.1	type II secretion system minor pseudopilin GspJ	-
AAHZ67_RS21035 (AAHZ67_21015)	gspK	4268256..4269242 (+)	987	WP_021467522.1	type II secretion system minor pseudopilin GspK	-
AAHZ67_RS21040 (AAHZ67_21020)	gspL	4269229..4270422 (+)	1194	WP_020804558.1	type II secretion system protein GspL	-
AAHZ67_RS21045 (AAHZ67_21025)	-	4270415..4270900 (+)	486	WP_004151943.1	type II secretion system protein M	-
AAHZ67_RS21050 (AAHZ67_21030)	-	4270890..4271636 (+)	747	WP_021441215.1	type II secretion system protein N	-
AAHZ67_RS21055 (AAHZ67_21035)	pilD	4271633..4272433 (+)	801	WP_032414527.1	A24 family peptidase	Machinery gene
AAHZ67_RS21060 (AAHZ67_21040)	hrpB	4272481..4274910 (-)	2430	WP_042939508.1	ATP-dependent helicase HrpB	-
AAHZ67_RS21065 (AAHZ67_21045)	thpR	4274983..4275519 (+)	537	WP_004145901.1	RNA 2',3'-cyclic phosphodiesterase	-
AAHZ67_RS21070 (AAHZ67_21050)	sfsA	4275519..4276235 (+)	717	WP_002888848.1	DNA/RNA nuclease SfsA	-
AAHZ67_RS21075 (AAHZ67_21055)	dksA	4276398..4276853 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29419.04 Da
• Isoelectric Point: 8.8894

>NTDB_id=991633 AAHZ67_RS21055 WP_032414527.1 4271633..4272433(+) (pilD) [Klebsiella pneumoniae strain Kpn292]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPISWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMI

Nucleotide

• Length: 801 bp

>NTDB_id=991633 AAHZ67_RS21055 WP_032414527.1 4271633..4272433(+) (pilD) [Klebsiella pneumoniae strain Kpn292]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTACTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGTATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGCTCTTCCTGCCCGCAGTGCCGCCAGCCGATCTCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCAGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACTCTACTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGGGTATTTTTCTCTGGCAGCAGATGATCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.057	99.624	0.489
pilD	Vibrio campbellii strain DS40M4	46.545	100	0.481
pilD	Acinetobacter nosocomialis M2	46.388	98.872	0.459
pilD	Acinetobacter baumannii D1279779	45.627	98.872	0.451
pilD	Neisseria gonorrhoeae MS11	43.922	95.865	0.421