Detailed information NTG0991609

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AAHY91_RS20785
• Genome accession: NZ_CP153675
• Coordinates: 4242035..4242835 (+)
• Length: 266 a.a.
• NCBI ID: WP_004145898.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae strain Kpn4356
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4237035..4247835

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAHY91_RS20750 (AAHY91_20705)	gspH	4237191..4237700 (+)	510	WP_023341042.1	type II secretion system minor pseudopilin GspH	-
AAHY91_RS20755 (AAHY91_20710)	gspI	4237703..4238068 (+)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
AAHY91_RS20760 (AAHY91_20715)	gspJ	4238065..4238661 (+)	597	WP_023341041.1	type II secretion system minor pseudopilin GspJ	-
AAHY91_RS20765 (AAHY91_20720)	gspK	4238658..4239644 (+)	987	WP_004178610.1	type II secretion system minor pseudopilin GspK	-
AAHY91_RS20770 (AAHY91_20725)	gspL	4239631..4240824 (+)	1194	WP_373853325.1	type II secretion system protein GspL	-
AAHY91_RS20775 (AAHY91_20730)	-	4240817..4241302 (+)	486	WP_004183037.1	type II secretion system protein M	-
AAHY91_RS20780 (AAHY91_20735)	-	4241292..4242038 (+)	747	WP_004145897.1	type II secretion system protein N	-
AAHY91_RS20785 (AAHY91_20740)	pilD	4242035..4242835 (+)	801	WP_004145898.1	A24 family peptidase	Machinery gene
AAHY91_RS20790 (AAHY91_20745)	hrpB	4242883..4245312 (-)	2430	WP_373857938.1	ATP-dependent helicase HrpB	-
AAHY91_RS20795 (AAHY91_20750)	thpR	4245385..4245921 (+)	537	WP_004177389.1	RNA 2',3'-cyclic phosphodiesterase	-
AAHY91_RS20800 (AAHY91_20755)	sfsA	4245921..4246637 (+)	717	WP_002888848.1	DNA/RNA nuclease SfsA	-
AAHY91_RS20805 (AAHY91_20760)	dksA	4246800..4247255 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29389.01 Da
• Isoelectric Point: 8.8894

>NTDB_id=991609 AAHY91_RS20785 WP_004145898.1 4242035..4242835(+) (pilD) [Klebsiella pneumoniae strain Kpn4356]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMV

Nucleotide

• Length: 801 bp

>NTDB_id=991609 AAHY91_RS20785 WP_004145898.1 4242035..4242835(+) (pilD) [Klebsiella pneumoniae strain Kpn4356]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTGCTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGCTCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGGCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTAGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGA
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTACTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGGGTATTTTTCTCTGGCAGCAGATGGTCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.434	99.624	0.492
pilD	Vibrio campbellii strain DS40M4	46.182	100	0.477
pilD	Acinetobacter nosocomialis M2	46.008	98.872	0.455
pilD	Acinetobacter baumannii D1279779	45.247	98.872	0.447
pilD	Neisseria gonorrhoeae MS11	43.295	98.12	0.425