Detailed information NTG0099155

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACGHAS_RS23625
• Genome accession: NZ_AP035801
• Coordinates: 4873067..4874092 (+)
• Length: 341 a.a.
• NCBI ID: WP_390416406.1
• Uniprot ID: -
• Organism: Escherichia coli strain E. coli JCM:5491
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4868067..4879092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGHAS_RS23605 (ReJCM5491_44580)	metJ	4869252..4869569 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACGHAS_RS23610 (ReJCM5491_44590)	yiiX	4869629..4870237 (+)	609	WP_000702296.1	YiiX family permuted papain-like enzyme	-
ACGHAS_RS23615 (ReJCM5491_44600)	rpmE	4870298..4870510 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACGHAS_RS23620 (ReJCM5491_44610)	priA	4870713..4872911 (+)	2199	WP_001305041.1	primosomal protein N'	Machinery gene
ACGHAS_RS23625 (ReJCM5491_44620)	cytR	4873067..4874092 (+)	1026	WP_390416406.1	DNA-binding transcriptional regulator CytR	Regulator
ACGHAS_RS23630 (ReJCM5491_44630)	ftsN	4874184..4875143 (+)	960	WP_000068846.1	cell division protein FtsN	-
ACGHAS_RS23635 (ReJCM5491_44640)	hslV	4875236..4875766 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACGHAS_RS23640 (ReJCM5491_44650)	hslU	4875776..4877107 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACGHAS_RS23645 (ReJCM5491_44660)	menA	4877174..4878100 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACGHAS_RS23650 (ReJCM5491_44670)	rraA	4878193..4878678 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACGHAS_RS23655 (ReJCM5491_44680)	zapB	4878763..4879008 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37877.82 Da
• Isoelectric Point: 6.1637

>NTDB_id=99155 ACGHAS_RS23625 WP_390416406.1 4873067..4874092(+) (cytR) [Escherichia coli strain E. coli JCM:5491]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMELGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=99155 ACGHAS_RS23625 WP_390416406.1 4873067..4874092(+) (cytR) [Escherichia coli strain E. coli JCM:5491]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGAGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625