Detailed information NTG0991537

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: AAH451_RS21335
• Genome accession: NZ_CP153667
• Coordinates: 4361361..4362161 (+)
• Length: 266 a.a.
• NCBI ID: WP_004145898.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae strain Kpn168
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4356361..4367161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAH451_RS21300 (AAH451_21265)	gspH	4356517..4357032 (+)	516	WP_029602499.1	type II secretion system minor pseudopilin GspH	-
AAH451_RS21305 (AAH451_21270)	gspI	4357029..4357394 (+)	366	WP_029602500.1	type II secretion system minor pseudopilin GspI	-
AAH451_RS21310 (AAH451_21275)	gspJ	4357391..4357987 (+)	597	WP_012737414.1	type II secretion system minor pseudopilin GspJ	-
AAH451_RS21315 (AAH451_21280)	gspK	4357984..4358970 (+)	987	WP_004178610.1	type II secretion system minor pseudopilin GspK	-
AAH451_RS21320 (AAH451_21285)	gspL	4358957..4360150 (+)	1194	WP_029602501.1	type II secretion system protein GspL	-
AAH451_RS21325 (AAH451_21290)	-	4360143..4360628 (+)	486	WP_004145896.1	type II secretion system protein M	-
AAH451_RS21330 (AAH451_21295)	-	4360618..4361364 (+)	747	WP_023316460.1	type II secretion system protein N	-
AAH451_RS21335 (AAH451_21300)	pilD	4361361..4362161 (+)	801	WP_004145898.1	A24 family peptidase	Machinery gene
AAH451_RS21340 (AAH451_21305)	hrpB	4362209..4364638 (-)	2430	WP_029602503.1	ATP-dependent helicase HrpB	-
AAH451_RS21345 (AAH451_21310)	thpR	4364711..4365247 (+)	537	WP_004177389.1	RNA 2',3'-cyclic phosphodiesterase	-
AAH451_RS21350 (AAH451_21315)	sfsA	4365247..4365963 (+)	717	WP_002888848.1	DNA/RNA nuclease SfsA	-
AAH451_RS21355 (AAH451_21320)	dksA	4366126..4366581 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29389.01 Da
• Isoelectric Point: 8.8894

>NTDB_id=991537 AAH451_RS21335 WP_004145898.1 4361361..4362161(+) (pilD) [Klebsiella pneumoniae strain Kpn168]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMV

Nucleotide

• Length: 801 bp

>NTDB_id=991537 AAH451_RS21335 WP_004145898.1 4361361..4362161(+) (pilD) [Klebsiella pneumoniae strain Kpn168]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTGCTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGCTCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTGCTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGGGTATTTTTCTCTGGCAGCAGATGGTCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.434	99.624	0.492
pilD	Vibrio campbellii strain DS40M4	46.182	100	0.477
pilD	Acinetobacter nosocomialis M2	46.008	98.872	0.455
pilD	Acinetobacter baumannii D1279779	45.247	98.872	0.447
pilD	Neisseria gonorrhoeae MS11	43.295	98.12	0.425