Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SP4011_RS10050 Genome accession   NZ_AP026968
Coordinates   2032880..2034139 (-) Length   419 a.a.
NCBI ID   WP_338619200.1    Uniprot ID   -
Organism   Streptococcus parapneumoniae strain SP4011     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2027880..2039139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SP4011_RS10040 (SP4011_19380) bglA 2029536..2030915 (-) 1380 WP_338619198.1 6-phospho-beta-glucosidase -
  SP4011_RS10045 (SP4011_19390) - 2031014..2032867 (-) 1854 WP_338619199.1 proline--tRNA ligase -
  SP4011_RS10050 (SP4011_19400) eeP 2032880..2034139 (-) 1260 WP_338619200.1 RIP metalloprotease RseP Regulator
  SP4011_RS10055 (SP4011_19410) - 2034161..2034964 (-) 804 WP_338619201.1 phosphatidate cytidylyltransferase -
  SP4011_RS10060 (SP4011_19420) - 2034973..2035731 (-) 759 WP_000466722.1 isoprenyl transferase -
  SP4011_RS10065 (SP4011_19430) - 2036079..2036651 (-) 573 WP_338619204.1 nucleotidyltransferase family protein -
  SP4011_RS10070 (SP4011_19440) ruvB 2036632..2037630 (-) 999 WP_004242086.1 Holliday junction branch migration DNA helicase RuvB -
  SP4011_RS10075 - 2037764..2037856 (+) 93 WP_000969509.1 type I toxin-antitoxin system Fst family toxin -
  SP4011_RS10080 - 2038177..2038269 (+) 93 WP_000970382.1 type I toxin-antitoxin system Fst family toxin -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45837.55 Da        Isoelectric Point: 5.4592

>NTDB_id=99139 SP4011_RS10050 WP_338619200.1 2032880..2034139(-) (eeP) [Streptococcus parapneumoniae strain SP4011]
MLGILTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVSLTLTDDGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKIFAVDHDATVVEADGTEVRIAPLDVQY
QNATIWGKLITNFAGPMNNFILGVVVFWILIFMQGGVRDVDTNQFHVMPQGALAKVGVPETAQITKIGSHEISNWESLIQ
AVETETKDKTAPTLDVTISENGSDKQVTVAPEESQGCYLLGVQPGIKSDFLSMFVGGFTTAADSALRILSALKNLIFQPD
LNKLGGPVAIFKASSDAAKNGIENVLYFLAMISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTLAGVVI
MVVLMIAVTWNDIMRLFFR

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=99139 SP4011_RS10050 WP_338619200.1 2032880..2034139(-) (eeP) [Streptococcus parapneumoniae strain SP4011]
ATGCTCGGAATTTTAACCTTTATTCTGGTTTTCGGGATTATTGTGGTAGTGCACGAGTTCGGACACTTCTACTTTGCCAA
GAAATCAGGGATTCTAGTGCGTGAATTTGCCATTGGCATGGGACCTAAAATCTTTGCTCACATTGGCAAGGATGGAACGG
CCTACACCATTCGAATCTTACCTCTGGGTGGCTATGTTCGCATGGCCGGTTGGGGTGATGATACAACTGAAATTAAGACA
GGAACTCCTGTCAGTTTGACGCTTACTGATGATGGTAAGGTTAAACGCATCAATCTTTCAGGTAAAAAATTGGATCAAAC
GGCCCTCCCTATGCAGGTGACCCAGTTTGATTTTGAAGACAAGCTCTTTATCAAAGGATTGGTTCTGGAAGAAGAAAAAA
TATTTGCAGTAGATCACGATGCAACGGTTGTGGAAGCAGATGGTACTGAGGTTCGGATTGCACCTTTAGATGTGCAATAT
CAAAATGCAACTATCTGGGGGAAACTGATTACCAACTTTGCAGGACCTATGAATAACTTTATCTTAGGTGTCGTTGTTTT
TTGGATTTTAATCTTCATGCAGGGTGGTGTCAGAGATGTTGATACCAATCAGTTCCATGTCATGCCCCAAGGGGCCTTGG
CTAAGGTAGGAGTGCCAGAAACGGCTCAGATTACCAAGATTGGTTCACATGAGATTAGCAACTGGGAAAGCTTGATCCAG
GCTGTGGAAACAGAAACTAAAGATAAGACGGCCCCGACCTTGGATGTGACTATTTCTGAAAATGGTAGTGACAAACAAGT
CACTGTTGCACCGGAAGAAAGTCAAGGCTGTTACCTTCTAGGTGTTCAACCGGGGATTAAGTCAGATTTTCTATCCATGT
TTGTAGGTGGTTTTACAACTGCTGCTGACTCGGCTCTACGAATTCTCTCAGCTCTGAAAAACCTGATTTTCCAACCGGAT
TTGAACAAGCTAGGTGGACCTGTTGCCATCTTTAAGGCAAGTAGTGATGCTGCTAAAAATGGAATTGAGAATGTCTTGTA
CTTCTTGGCAATGATTTCCATCAATATTGGGATTTTTAATCTTATTCCGATTCCAGCCCTGGATGGTGGTAAGATTGTGC
TCAATATCCTGGAAGCCATTCGCCGTAAACCATTAAAACAAGAAATTGAAACCTATGTCACCTTGGCCGGAGTGGTCATC
ATGGTTGTCTTGATGATTGCTGTGACTTGGAATGACATCATGCGACTCTTTTTTAGATAA

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

64.048

100

0.642

  eeP Streptococcus thermophilus LMG 18311

63.81

100

0.64


Multiple sequence alignment