Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   VV28_RS08720 Genome accession   NZ_LN680001
Coordinates   1724005..1725273 (+) Length   422 a.a.
NCBI ID   WP_010886508.1    Uniprot ID   O31754
Organism   Bacillus subtilis strain BS34A     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1719005..1730273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VV28_RS08695 (BS34A_18190) pyrH 1719778..1720500 (+) 723 WP_003220923.1 UMP kinase -
  VV28_RS08700 (BS34A_18200) frr 1720502..1721059 (+) 558 WP_003231927.1 ribosome recycling factor -
  VV28_RS08705 (BS34A_18210) uppS 1721190..1721972 (+) 783 WP_003231925.1 isoprenyl transferase -
  VV28_RS08710 (BS34A_18220) cdsA 1721976..1722785 (+) 810 WP_003231924.1 phosphatidate cytidylyltransferase -
  VV28_RS08715 (BS34A_18230) dxr 1722847..1723998 (+) 1152 WP_003245155.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  VV28_RS08720 (BS34A_18240) eeP 1724005..1725273 (+) 1269 WP_010886508.1 RIP metalloprotease RseP Regulator
  VV28_RS08725 (BS34A_18250) proS 1725306..1727000 (+) 1695 WP_003231918.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46743.53 Da        Isoelectric Point: 5.0797

>NTDB_id=991243 VV28_RS08720 WP_010886508.1 1724005..1725273(+) (eeP) [Bacillus subtilis strain BS34A]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKEDQVEKVIINQKEKYPDALVIEVETADLEHDMKITGYEQGKEDELSSFTVSETSFFIVDGEEVQIAPYN
RQFGSKPVWQRIKAIAAGPIMNFILAYVILVMLGLIQGVPSNEPMLGQLTDNGRAAEAGLKEGDYIQSINGEKMRSWTDI
VSAVKENPEKEMDVAVKRDNKTLHISVTPEAVKDENKKTIGRFGSYAPTEKGVLSAVAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIVNLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINREKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=991243 VV28_RS08720 WP_010886508.1 1724005..1725273(+) (eeP) [Bacillus subtilis strain BS34A]
ATGTTCGTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGTTTTCTTCCATGAACTGGGCCATTTATTGCT
AGCCCAAAGAGCGGGAATTCTCTGCCGTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAAAAAAATGAAA
CAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGATTTGTTCGTATGGCCGGCGAAGATCCGGAAATGATTGAGGTGAAA
CCCGGATACACGGTCGGGCTTCTGTTTAATAAGGAAGATCAAGTTGAGAAAGTCATCATCAATCAAAAGGAAAAATATCC
GGATGCTTTAGTCATTGAAGTGGAAACAGCGGATCTAGAGCATGACATGAAGATCACCGGTTATGAACAGGGGAAAGAGG
ACGAACTTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGACGGAGAAGAAGTGCAGATTGCGCCGTATAAT
CGCCAATTTGGTTCCAAACCTGTATGGCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTATTTTAGCTTA
CGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCGTCAAATGAACCTATGCTCGGGCAGCTGACAGACAATGGAC
GGGCGGCTGAAGCAGGGCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAATGAGGTCTTGGACTGACATT
GTCTCCGCTGTAAAAGAAAACCCGGAGAAAGAAATGGACGTTGCAGTAAAAAGAGATAACAAAACGCTTCATATTTCGGT
GACTCCGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGACGTTTCGGTTCCTATGCGCCGACTGAAAAAGGCGTAC
TCTCAGCGGTTGCTTACGGCGCGACATCAACAGTTGATGTCACCAAAGCCATTTTAACCAATCTGAGCAAATTAGTAACA
GGCCAATTTAAACTCGATATGCTGTCAGGTCCTGTCGGCATATATGACATGACAGACCAAGTGGCGAAAACAGGGATCGT
GAACTTATTTCAGTTTGCGGCGTTTTTAAGCATTAACCTTGGGATTGTCAACCTGCTTCCGATTCCGGCACTTGACGGAG
GAAGACTGTTGTTTCTATTTATTGAAGCGATTCGGGGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTGTTTATC
GGAGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGGCTGTTTTTGTAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-408)

PDZ domain (PDZ_6)

(212-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O31754

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.211

100

0.4
  eeP Streptococcus thermophilus LMG 18311

39.344

100

0.398