Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | VV28_RS07955 | Genome accession | NZ_LN680001 |
| Coordinates | 1572742..1573767 (+) | Length | 341 a.a. |
| NCBI ID | WP_003245451.1 | Uniprot ID | O34470 |
| Organism | Bacillus subtilis strain BS34A | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1567742..1578767
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VV28_RS07920 (BS34A_16580) | ylbE | 1568042..1568281 (+) | 240 | WP_003232231.1 | YlbE-like family protein | - |
| VV28_RS07925 (BS34A_16590) | ylbF | 1568397..1568846 (+) | 450 | WP_003221370.1 | regulatory iron-sulfur-containing complex subunit RicF | Regulator |
| VV28_RS07930 (BS34A_16600) | ylbG | 1568901..1569173 (+) | 273 | WP_009967171.1 | YlbG family protein | - |
| VV28_RS07935 (BS34A_16620) | rsmD | 1569496..1570050 (+) | 555 | WP_003232227.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| VV28_RS07940 (BS34A_16630) | coaD | 1570055..1570540 (+) | 486 | WP_003245283.1 | pantetheine-phosphate adenylyltransferase | - |
| VV28_RS07945 (BS34A_16640) | spoVV | 1570551..1571777 (-) | 1227 | WP_003245492.1 | dipicolinic acid transporter SpoVV | - |
| VV28_RS07950 (BS34A_16650) | ylbK | 1571958..1572740 (+) | 783 | WP_003232221.1 | patatin family protein | - |
| VV28_RS07955 (BS34A_16660) | sepM | 1572742..1573767 (+) | 1026 | WP_003245451.1 | protease DdcP | Regulator |
| VV28_RS07960 (BS34A_16670) | tmcAL | 1573784..1575031 (-) | 1248 | WP_003244707.1 | nucleotidyltransferase | - |
| VV28_RS07965 (BS34A_16680) | - | 1575028..1575213 (-) | 186 | WP_003232215.1 | hypothetical protein | - |
| VV28_RS07970 (BS34A_16690) | ylbN | 1575241..1575759 (+) | 519 | WP_003232214.1 | DUF177 domain-containing protein | - |
| VV28_RS07975 (BS34A_16700) | rpmF | 1575781..1575960 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| VV28_RS07980 (BS34A_16710) | gerR | 1576106..1576687 (+) | 582 | WP_003232210.1 | sporulation specific transcriptional regulator GerR | - |
| VV28_RS07985 (BS34A_16720) | ylbP | 1576744..1577226 (-) | 483 | WP_003244940.1 | N-acetyltransferase | - |
| VV28_RS07990 (BS34A_16730) | panEA | 1577386..1578282 (+) | 897 | WP_003232206.1 | 2-dehydropantoate 2-reductase | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37651.23 Da Isoelectric Point: 6.5347
>NTDB_id=991235 VV28_RS07955 WP_003245451.1 1572742..1573767(+) (sepM) [Bacillus subtilis strain BS34A]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
Nucleotide
Download Length: 1026 bp
>NTDB_id=991235 VV28_RS07955 WP_003245451.1 1572742..1573767(+) (sepM) [Bacillus subtilis strain BS34A]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
39.143 |
100 |
0.402 |