Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACNRMP_RS14730 Genome accession   NZ_JBLWDC010000001
Coordinates   3159828..3160271 (+) Length   147 a.a.
NCBI ID   WP_071615340.1    Uniprot ID   -
Organism   Ralstonia pseudosolanacearum strain PD 7123     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3154828..3165271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNRMP_RS14705 (ACNRMP_14705) - 3154933..3155781 (-) 849 WP_028852675.1 TPM domain-containing protein -
  ACNRMP_RS14710 (ACNRMP_14710) - 3155794..3156420 (-) 627 WP_028852676.1 LemA family protein -
  ACNRMP_RS14715 (ACNRMP_14715) dapA 3156801..3157715 (+) 915 WP_028852677.1 4-hydroxy-tetrahydrodipicolinate synthase -
  ACNRMP_RS14720 (ACNRMP_14720) hemL 3157818..3159119 (-) 1302 WP_020831381.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ACNRMP_RS14725 (ACNRMP_14725) - 3159331..3159513 (+) 183 WP_003261842.1 rubredoxin -
  ACNRMP_RS14730 (ACNRMP_14730) pilG 3159828..3160271 (+) 444 WP_071615340.1 response regulator Regulator
  ACNRMP_RS14735 (ACNRMP_14735) pilH 3160303..3160671 (+) 369 WP_003269243.1 response regulator Machinery gene
  ACNRMP_RS14740 (ACNRMP_14740) - 3160730..3161275 (+) 546 WP_028852678.1 chemotaxis protein CheW -
  ACNRMP_RS14745 (ACNRMP_14745) - 3161521..3163752 (+) 2232 WP_011000626.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 15807.37 Da        Isoelectric Point: 8.2887

>NTDB_id=990726 ACNRMP_RS14730 WP_071615340.1 3159828..3160271(+) (pilG) [Ralstonia pseudosolanacearum strain PD 7123]
MQSARVEQLTNSQPLASSLAGRKVLVIDDSSTIRRTAQIFLSKVDCQVVLAEDGFDALAKLGDFKPDIVFCDILMPKLDG
YLTCSLIKKSPKFHATPVVMLSSRDGVFDRARGKLVGAVDHLAKPFSREALLEAVQAHLPAAAGAAQ

Nucleotide


Download         Length: 444 bp        

>NTDB_id=990726 ACNRMP_RS14730 WP_071615340.1 3159828..3160271(+) (pilG) [Ralstonia pseudosolanacearum strain PD 7123]
ATGCAATCCGCGCGGGTGGAACAACTGACCAATTCCCAACCGCTGGCGAGTTCGCTTGCCGGCCGTAAAGTGCTGGTGAT
CGACGATTCCAGTACCATCCGCCGTACCGCGCAGATTTTCCTGTCCAAGGTCGATTGCCAGGTCGTGCTGGCCGAAGACG
GGTTCGATGCGCTGGCCAAGCTGGGTGACTTCAAGCCGGACATCGTCTTTTGCGACATCCTGATGCCCAAGCTGGACGGT
TACCTGACCTGCTCACTGATCAAGAAAAGCCCGAAGTTTCATGCCACGCCCGTGGTCATGCTGTCGTCGCGCGACGGGGT
GTTCGACCGCGCGCGCGGCAAGCTGGTCGGGGCGGTGGACCACCTTGCCAAGCCTTTCTCGCGGGAAGCGCTGCTGGAGG
CGGTCCAGGCGCATCTGCCGGCAGCCGCTGGCGCCGCGCAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(24-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

54.622

80.952

0.442