Detailed information NTG0989990

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EC958_RS22595
• Genome accession: NZ_HG941718
• Coordinates: 4495482..4496507 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli O25b:H4-ST131 strain EC958
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4490482..4501507

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EC958_RS22565 (EC958_4413)	zapB	4490566..4490811 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
EC958_RS22570 (EC958_4414)	rraA	4490896..4491381 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EC958_RS22575 (EC958_4415)	menA	4491474..4492400 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EC958_RS22580 (EC958_4416)	hslU	4492467..4493798 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
EC958_RS22585 (EC958_4417)	hslV	4493808..4494338 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EC958_RS22590 (EC958_4418)	ftsN	4494431..4495390 (-)	960	WP_000068834.1	cell division protein FtsN	-
EC958_RS22595 (EC958_4419)	cytR	4495482..4496507 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
EC958_RS22600 (EC958_4420)	priA	4496663..4498861 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
EC958_RS22605 (EC958_4421)	rpmE	4499064..4499276 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
EC958_RS22610 (EC958_4422)	yiiX	4499337..4499945 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
EC958_RS22615 (EC958_4423)	metJ	4500005..4500322 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=989990 EC958_RS22595 WP_000644908.1 4495482..4496507(-) (cytR) [Escherichia coli O25b:H4-ST131 strain EC958]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=989990 EC958_RS22595 WP_000644908.1 4495482..4496507(-) (cytR) [Escherichia coli O25b:H4-ST131 strain EC958]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625