Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GZ111_RS10985 | Genome accession | NZ_CP152420 |
| Coordinates | 2272221..2272616 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 17-021 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2267221..2277616
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZ111_RS10955 (GZ111_010955) | - | 2268479..2268883 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| GZ111_RS10960 (GZ111_010960) | - | 2269221..2269313 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| GZ111_RS10965 (GZ111_010965) | - | 2269445..2269678 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| GZ111_RS10970 (GZ111_010970) | murA | 2269789..2271054 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| GZ111_RS10975 (GZ111_010975) | fabZ | 2271088..2271528 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| GZ111_RS10980 (GZ111_010980) | - | 2271587..2272027 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| GZ111_RS10985 (GZ111_010985) | ssb | 2272221..2272616 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| GZ111_RS10990 (GZ111_010990) | sceD | 2273005..2273700 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| GZ111_RS10995 (GZ111_010995) | tenA | 2274087..2274776 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| GZ111_RS11000 (GZ111_011000) | thiD | 2274769..2275599 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| GZ111_RS11005 (GZ111_011005) | thiM | 2275583..2276374 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| GZ111_RS11010 (GZ111_011010) | thiE | 2276376..2277017 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=989225 GZ111_RS10985 WP_000932694.1 2272221..2272616(+) (ssb) [Staphylococcus aureus strain 17-021]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=989225 GZ111_RS10985 WP_000932694.1 2272221..2272616(+) (ssb) [Staphylococcus aureus strain 17-021]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |