Detailed information NTG0098922

Bioinformatically predicted

Overview

• Name: comX/comX2
• Type: Regulator
• Locus tag: R8570_RS09625
• Genome accession: NZ_AP026932
• Coordinates: 1887236..1887715 (-)
• Length: 159 a.a.
• NCBI ID: WP_000588874.1
• Uniprot ID: A0AA44S6A3
• Organism: Streptococcus pneumoniae strain PZ900701549
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1882236..1892715

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8570_RS09625 (PC1528_18970)	comX/comX2	1887236..1887715 (-)	480	WP_000588874.1	sigma-70 family RNA polymerase sigma factor	Regulator
R8570_RS09630 (PC1528_18980)	nusG	1887837..1888373 (-)	537	WP_000376736.1	transcription termination/antitermination protein NusG	-
R8570_RS09635 (PC1528_18990)	secE	1888428..1888604 (-)	177	WP_001210991.1	preprotein translocase subunit SecE	-
R8570_RS09640 (PC1528_19000)	rpmG	1888614..1888766 (-)	153	WP_001809375.1	50S ribosomal protein L33	-
R8570_RS09645 (PC1528_19010)	-	1888930..1890333 (+)	1404	WP_055386821.1	ISNCY-like element IS1202 family transposase	-

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 19845.50 Da
• Isoelectric Point: 7.3795

>NTDB_id=98922 R8570_RS09625 WP_000588874.1 1887236..1887715(-) (comX/comX2) [Streptococcus pneumoniae strain PZ900701549]
MIKELYEEVQGTVYKCRNEYYLHLWELSDWDQEGMLCLHELISREEGLVDDIPRLRKYFKTKFRNRILDYIRKQESQKRK
YDKEPYEEVGELSHRISEGGLWLDDYYLFHETLRDYRNKQSKEKQEELERVLSNERFRGRQRVLRDLRIVFKEFTIRTH

Nucleotide

• Length: 480 bp

>NTDB_id=98922 R8570_RS09625 WP_000588874.1 1887236..1887715(-) (comX/comX2) [Streptococcus pneumoniae strain PZ900701549]
ATGATTAAAGAATTGTATGAAGAAGTCCAAGGGACTGTGTATAAGTGTAGAAATGAATATTACCTTCATTTATGGGAATT
ATCGGATTGGGACCAAGAAGGCATGCTCTGCTTACATGAATTGATTAGTAGAGAAGAAGGACTGGTAGACGATATTCCAC
GTTTAAGGAAATATTTCAAAACCAAGTTTCGAAATCGAATTTTAGACTATATCCGTAAGCAGGAAAGTCAGAAGCGTAAA
TACGATAAAGAACCCTATGAAGAAGTGGGTGAGCTCAGTCATCGTATAAGTGAGGGGGGTCTCTGGCTAGATGATTATTA
TCTCTTTCATGAAACACTAAGAGATTATAGAAACAAACAAAGTAAAGAGAAACAAGAAGAACTAGAACGTGTCTTAAGCA
ATGAACGATTTCGAGGGCGTCAAAGAGTATTAAGAGACTTACGCATTGTGTTTAAGGAGTTTACTATCCGTACCCACTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/comX2	Streptococcus pneumoniae Rx1	98.742	100	0.987
comX/comX1	Streptococcus pneumoniae Rx1	98.742	100	0.987
comX/comX2	Streptococcus pneumoniae D39	98.742	100	0.987
comX/comX1	Streptococcus pneumoniae D39	98.742	100	0.987
comX/comX2	Streptococcus pneumoniae R6	98.742	100	0.987
comX/comX1	Streptococcus pneumoniae R6	98.742	100	0.987
comX/comX2	Streptococcus pneumoniae TIGR4	98.113	100	0.981
comX/comX1	Streptococcus pneumoniae TIGR4	98.113	100	0.981
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	91.195	100	0.912
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	91.195	100	0.912
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	89.308	100	0.893
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	87.975	99.371	0.874
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	48.718	98.113	0.478
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	48.718	98.113	0.478
comX/sigX	Streptococcus suis D9	47.02	94.969	0.447
comX/sigX	Streptococcus suis isolate S10	47.02	94.969	0.447
comX/sigX	Streptococcus suis P1/7	47.02	94.969	0.447
comX/sigX	Streptococcus mutans UA159	44.667	94.34	0.421
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40	94.34	0.377