Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | AAFQ93_RS04675 | Genome accession | NZ_CP152419 |
| Coordinates | 971254..972486 (+) | Length | 410 a.a. |
| NCBI ID | WP_006145154.1 | Uniprot ID | A0A1S1GYW6 |
| Organism | Streptococcus nidrosiense strain SO-23-1 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 966254..977486
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFQ93_RS04655 (AAFQ93_04645) | - | 967970..969751 (+) | 1782 | WP_375555734.1 | ABC transporter ATP-binding protein | - |
| AAFQ93_RS04660 (AAFQ93_04650) | - | 969900..970418 (+) | 519 | WP_178895327.1 | DNA starvation/stationary phase protection protein | - |
| AAFQ93_RS04665 (AAFQ93_04655) | - | 970546..971052 (+) | 507 | WP_178895326.1 | dihydrofolate reductase | - |
| AAFQ93_RS04670 (AAFQ93_04660) | - | 971052..971222 (+) | 171 | WP_000442253.1 | hypothetical protein | - |
| AAFQ93_RS04675 (AAFQ93_04665) | clpX | 971254..972486 (+) | 1233 | WP_006145154.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| AAFQ93_RS04680 (AAFQ93_04670) | yihA | 972495..973082 (+) | 588 | WP_006150399.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| AAFQ93_RS04685 (AAFQ93_04675) | - | 973092..973472 (+) | 381 | WP_001140424.1 | RidA family protein | - |
| AAFQ93_RS04690 (AAFQ93_04680) | rapZ | 973524..974414 (+) | 891 | WP_070889283.1 | RNase adapter RapZ | - |
| AAFQ93_RS04695 (AAFQ93_04685) | - | 974411..975388 (+) | 978 | WP_001231098.1 | YvcK family protein | - |
| AAFQ93_RS04700 (AAFQ93_04690) | whiA | 975385..976296 (+) | 912 | WP_375555735.1 | DNA-binding protein WhiA | - |
| AAFQ93_RS04705 (AAFQ93_04695) | - | 976600..977295 (+) | 696 | WP_375555736.1 | lantibiotic protection ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 410 a.a. Molecular weight: 45644.18 Da Isoelectric Point: 4.4806
>NTDB_id=989170 AAFQ93_RS04675 WP_006145154.1 971254..972486(+) (clpX) [Streptococcus nidrosiense strain SO-23-1]
MPTNRKNDMMVYCSFCGKSQEEVKKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLARSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDVMFEVPSQENVKTVRITKEAVD
GTAKPILETA
MPTNRKNDMMVYCSFCGKSQEEVKKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLARSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDVMFEVPSQENVKTVRITKEAVD
GTAKPILETA
Nucleotide
Download Length: 1233 bp
>NTDB_id=989170 AAFQ93_RS04675 WP_006145154.1 971254..972486(+) (clpX) [Streptococcus nidrosiense strain SO-23-1]
ATGCCTACAAATAGGAAAAATGATATGATGGTTTATTGCTCATTTTGTGGCAAAAGCCAAGAAGAAGTTAAAAAAATAAT
CGCTGGGAACAACGCTTTTATCTGTAATGAGTGTGTGGAGTTAGCCCAGGAAATTATTCGTGAGGAGTTGGCAGAGGAAG
TCCTAGCAGACTTATCTGAAGTACCAAAACCAATCGAACTCTTAAACATCTTGAACCACTATGTGATTGGTCAAGATCGT
GCCAAACGTGCCTTGGCAGTAGCTGTATATAACCACTACAAACGCATCAATTTCCATGACACTCGTGAAGAGTCAGAAGA
TGTGGATTTGCAAAAATCAAACATTTTGATGATTGGCCCAACAGGTTCAGGTAAGACTTTCCTTGCTCAAACTCTTGCTA
GAAGTTTGAATGTACCTTTTGCCATCGCAGATGCAACAGCTCTTACTGAGGCTGGTTATGTTGGTGAGGACGTGGAGAAT
ATCCTCCTCAAACTCTTGCAAGCAGCTGACTTTAACATCGAACGTGCAGAACGTGGGATTATCTACGTGGATGAAATTGA
CAAGATTGCCAAGAAGAGCGAGAACGTGTCTATCACACGTGACGTTTCTGGTGAAGGGGTGCAACAAGCCCTCCTCAAGA
TTATTGAAGGTACAGTAGCAAGTGTTCCTCCACAAGGTGGACGCAAACATCCACAACAAGAGATGATTCAAGTAGATACT
AAGAATATTCTCTTCATTGTTGGTGGAGCCTTCGATGGCATCGAAGAGATTGTCAAACAGCGTCTTGGTGAAAAAGTTAT
CGGTTTTGGACAAAACAACAAGGCCATTGACGAAAACAGCTCATACATGCAAGAAATCATCGCAGAAGATATTCAAAAAT
TCGGTATTATTCCTGAGTTGATTGGACGCTTGCCTGTCTTTGCAGCCTTGGAGCAGTTGACTGTAGATGATTTGGTTCGC
ATCTTGAAGGAACCAAGAAATGCCTTGGTTAAACAATACCAGACCTTGCTTTCTTATGATGATGTTGAGCTTGAATTTGA
CGACGAAGCTCTCCAAGAAATTGCAAACAAAGCCATCGAACGTAAAACGGGTGCGCGTGGTCTTCGCTCAATTATCGAAG
AAACCATGCTAGATGTTATGTTTGAGGTTCCAAGTCAAGAAAATGTGAAAACTGTTCGTATCACAAAAGAAGCAGTTGAC
GGAACGGCTAAGCCAATTCTAGAGACAGCCTAG
ATGCCTACAAATAGGAAAAATGATATGATGGTTTATTGCTCATTTTGTGGCAAAAGCCAAGAAGAAGTTAAAAAAATAAT
CGCTGGGAACAACGCTTTTATCTGTAATGAGTGTGTGGAGTTAGCCCAGGAAATTATTCGTGAGGAGTTGGCAGAGGAAG
TCCTAGCAGACTTATCTGAAGTACCAAAACCAATCGAACTCTTAAACATCTTGAACCACTATGTGATTGGTCAAGATCGT
GCCAAACGTGCCTTGGCAGTAGCTGTATATAACCACTACAAACGCATCAATTTCCATGACACTCGTGAAGAGTCAGAAGA
TGTGGATTTGCAAAAATCAAACATTTTGATGATTGGCCCAACAGGTTCAGGTAAGACTTTCCTTGCTCAAACTCTTGCTA
GAAGTTTGAATGTACCTTTTGCCATCGCAGATGCAACAGCTCTTACTGAGGCTGGTTATGTTGGTGAGGACGTGGAGAAT
ATCCTCCTCAAACTCTTGCAAGCAGCTGACTTTAACATCGAACGTGCAGAACGTGGGATTATCTACGTGGATGAAATTGA
CAAGATTGCCAAGAAGAGCGAGAACGTGTCTATCACACGTGACGTTTCTGGTGAAGGGGTGCAACAAGCCCTCCTCAAGA
TTATTGAAGGTACAGTAGCAAGTGTTCCTCCACAAGGTGGACGCAAACATCCACAACAAGAGATGATTCAAGTAGATACT
AAGAATATTCTCTTCATTGTTGGTGGAGCCTTCGATGGCATCGAAGAGATTGTCAAACAGCGTCTTGGTGAAAAAGTTAT
CGGTTTTGGACAAAACAACAAGGCCATTGACGAAAACAGCTCATACATGCAAGAAATCATCGCAGAAGATATTCAAAAAT
TCGGTATTATTCCTGAGTTGATTGGACGCTTGCCTGTCTTTGCAGCCTTGGAGCAGTTGACTGTAGATGATTTGGTTCGC
ATCTTGAAGGAACCAAGAAATGCCTTGGTTAAACAATACCAGACCTTGCTTTCTTATGATGATGTTGAGCTTGAATTTGA
CGACGAAGCTCTCCAAGAAATTGCAAACAAAGCCATCGAACGTAAAACGGGTGCGCGTGGTCTTCGCTCAATTATCGAAG
AAACCATGCTAGATGTTATGTTTGAGGTTCCAAGTCAAGAAAATGTGAAAACTGTTCGTATCACAAAAGAAGCAGTTGAC
GGAACGGCTAAGCCAATTCTAGAGACAGCCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
86.829 |
100 |
0.868 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
57.463 |
98.049 |
0.563 |