Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   AAFQ93_RS02800 Genome accession   NZ_CP152419
Coordinates   557264..558520 (+) Length   418 a.a.
NCBI ID   WP_375555521.1    Uniprot ID   -
Organism   Streptococcus nidrosiense strain SO-23-1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 552264..563520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAFQ93_RS02770 (AAFQ93_02780) - 552993..553571 (-) 579 WP_153225263.1 AAA family ATPase -
  AAFQ93_RS02775 (AAFQ93_02785) - 553571..554131 (-) 561 WP_223140449.1 GNAT family N-acetyltransferase -
  AAFQ93_RS02780 (AAFQ93_02790) - 554118..554696 (-) 579 WP_223140450.1 flavin reductase family protein -
  AAFQ93_RS02785 (AAFQ93_02795) - 555067..555462 (-) 396 WP_223140451.1 helix-hairpin-helix domain-containing protein -
  AAFQ93_RS02790 (AAFQ93_02800) - 555678..556430 (+) 753 WP_375555520.1 isoprenyl transferase -
  AAFQ93_RS02795 (AAFQ93_02805) - 556439..557242 (+) 804 WP_000613843.1 phosphatidate cytidylyltransferase -
  AAFQ93_RS02800 (AAFQ93_02810) eeP 557264..558520 (+) 1257 WP_375555521.1 RIP metalloprotease RseP Regulator
  AAFQ93_RS02805 (AAFQ93_02815) - 558538..560391 (+) 1854 WP_375555522.1 proline--tRNA ligase -
  AAFQ93_RS02810 (AAFQ93_02820) - 560606..561985 (+) 1380 WP_375555523.1 glycoside hydrolase family 1 protein -
  AAFQ93_RS02815 (AAFQ93_02825) - 562244..563296 (+) 1053 WP_375555525.1 LLM class flavin-dependent oxidoreductase -

Sequence


Protein


Download         Length: 418 a.a.        Molecular weight: 45783.36 Da        Isoelectric Point: 5.4951

>NTDB_id=989158 AAFQ93_RS02800 WP_375555521.1 557264..558520(+) (eeP) [Streptococcus nidrosiense strain SO-23-1]
MIGLLTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRLLPLGGYVRMAGWGEDTTEIKT
GTPASLTLAGDGKVKRINLSGKKVDQTALPMQVTQFDFEDKLFIRGLVLEEEKTFSVDHDATIVEADGTEVRIAPLDVQY
QNATVWGKLITNFAGPMNNFILGVIVFWILIFMQGGVRDAQTNNFSIIPDSALAKVGVENTAQITKVGSYEISNWSDLIQ
AVDAETKDKTAPVLDVTVSENGTEKQVSVTPEESQGRYILGVQPRLKSDIWSMFMGGFTTAADSALRILNALKSLIFQPD
LNKLGGPVAIFKASSDAAKNGLENVLYFLAMISINIGIFNLIPIPALDGGKIVLNIIEAIRRKPLKQEIETYVTLVGVVI
MVVLMLAVTWNDIMRTFF

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=989158 AAFQ93_RS02800 WP_375555521.1 557264..558520(+) (eeP) [Streptococcus nidrosiense strain SO-23-1]
ATGATAGGATTACTAACATTTATCCTAGTTTTCGGGATTATCGTGGTAGTTCACGAGTTCGGGCATTTTTACTTTGCTAA
GAAGTCCGGGATTTTGGTTCGTGAGTTTGCCATTGGTATGGGTCCCAAAATCTTTGCCCATATCGGAAAAGATGGGACTG
CTTATACTATTCGTCTCCTGCCACTGGGTGGTTACGTTCGTATGGCAGGCTGGGGTGAAGATACGACAGAGATTAAGACT
GGAACCCCTGCAAGTCTAACATTGGCAGGAGATGGTAAGGTCAAGCGTATCAATCTCTCTGGGAAAAAGGTTGACCAGAC
TGCTTTACCCATGCAGGTCACTCAGTTTGATTTTGAGGATAAACTCTTTATTAGAGGCTTGGTCTTGGAAGAGGAAAAGA
CTTTCTCAGTAGACCATGATGCGACCATTGTGGAAGCTGATGGAACGGAAGTTCGTATCGCTCCATTAGACGTCCAATAT
CAAAATGCGACTGTCTGGGGGAAATTGATTACCAACTTTGCTGGTCCTATGAATAACTTTATCCTAGGAGTTATCGTCTT
CTGGATCTTGATTTTCATGCAAGGTGGCGTTCGTGATGCGCAAACGAACAATTTCAGCATTATTCCAGATAGCGCTTTGG
CTAAGGTTGGAGTTGAAAATACGGCCCAAATCACTAAGGTCGGAAGTTATGAGATTTCAAACTGGTCAGATCTGATCCAG
GCGGTTGATGCAGAAACCAAGGACAAAACAGCGCCCGTTTTGGATGTGACAGTCTCTGAAAATGGAACTGAAAAACAAGT
GAGTGTGACACCTGAAGAAAGCCAAGGACGCTATATCTTGGGTGTTCAGCCGAGACTCAAATCAGATATCTGGTCTATGT
TTATGGGCGGATTTACAACTGCAGCTGATTCAGCCTTGCGAATTCTCAATGCTTTGAAAAGCTTGATCTTTCAACCAGAT
TTGAATAAGCTGGGCGGTCCTGTTGCTATCTTTAAGGCAAGTAGCGATGCTGCCAAGAATGGACTGGAAAATGTCTTGTA
CTTCTTGGCTATGATTTCCATCAATATCGGGATTTTCAATCTGATTCCAATCCCTGCGCTCGACGGTGGAAAAATCGTGC
TTAACATCATTGAAGCTATTCGCCGCAAACCACTAAAACAAGAAATTGAAACCTATGTCACTCTGGTTGGAGTTGTCATT
ATGGTCGTCTTGATGCTCGCCGTGACATGGAACGACATCATGCGTACCTTCTTTTAA

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

64.524

100

0.648

  eeP Streptococcus thermophilus LMG 18311

64.286

100

0.646


Multiple sequence alignment