Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   AAHH81_RS08820 Genome accession   NZ_CP152418
Coordinates   1729113..1729733 (-) Length   206 a.a.
NCBI ID   WP_000839908.1    Uniprot ID   A0A0B7M636
Organism   Streptococcus pneumoniae strain 20234287     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1724113..1734733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHH81_RS08795 (AAHH81_08780) recA 1724490..1725656 (-) 1167 WP_001085463.1 recombinase RecA Machinery gene
  AAHH81_RS08800 (AAHH81_08785) cinA 1725711..1726967 (-) 1257 WP_369916961.1 competence/damage-inducible protein A Machinery gene
  AAHH81_RS08805 (AAHH81_08790) brpA 1727052..1728068 (-) 1017 WP_000239283.1 biofilm formation/cell division transcriptional regulator BrpA -
  AAHH81_RS08810 (AAHH81_08795) - 1728076..1728594 (-) 519 WP_000455537.1 GNAT family N-acetyltransferase -
  AAHH81_RS08815 (AAHH81_08800) tsaE 1728584..1729027 (-) 444 WP_000288232.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  AAHH81_RS08820 (AAHH81_08805) comM 1729113..1729733 (-) 621 WP_000839908.1 hypothetical protein Regulator
  AAHH81_RS08825 (AAHH81_08810) - 1730116..1730979 (-) 864 WP_044812437.1 helix-turn-helix domain-containing protein -
  AAHH81_RS08830 (AAHH81_08815) - 1731171..1731341 (+) 171 WP_001227865.1 PhrA family quorum-sensing system peptide -
  AAHH81_RS08835 (AAHH81_08820) - 1731486..1733501 (+) 2016 WP_369916962.1 DUF1430 domain-containing protein -
  AAHH81_RS08840 (AAHH81_08825) - 1733503..1734135 (+) 633 WP_000571415.1 ABC transporter ATP-binding protein -
  AAHH81_RS08845 (AAHH81_08830) - 1734276..1734554 (+) 279 WP_000712962.1 hypothetical protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23552.72 Da        Isoelectric Point: 10.1254

>NTDB_id=989094 AAHH81_RS08820 WP_000839908.1 1729113..1729733(-) (comM) [Streptococcus pneumoniae strain 20234287]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=989094 AAHH81_RS08820 WP_000839908.1 1729113..1729733(-) (comM) [Streptococcus pneumoniae strain 20234287]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7M636

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

100

100

1
  comM Streptococcus pneumoniae R6

100

100

1
  comM Streptococcus pneumoniae TIGR4

100

100

1
  comM Streptococcus mitis NCTC 12261

38.974

94.66

0.369
  comM Streptococcus mitis SK321

38.974

94.66

0.369

Multiple sequence alignment