Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   ACNR93_RS05385 Genome accession   NZ_CP184736
Coordinates   1076427..1076867 (-) Length   146 a.a.
NCBI ID   WP_420543266.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1071427..1081867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS05375 (ACNR93_05375) rcrQ 1072847..1074619 (-) 1773 WP_420543264.1 ABC transporter ATP-binding protein Regulator
  ACNR93_RS05380 (ACNR93_05380) rcrP 1074609..1076423 (-) 1815 WP_420543265.1 ABC transporter ATP-binding protein Regulator
  ACNR93_RS05385 (ACNR93_05385) rcrR 1076427..1076867 (-) 441 WP_420543266.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ACNR93_RS05390 (ACNR93_05390) - 1077015..1077425 (-) 411 WP_420543267.1 peptide deformylase -
  ACNR93_RS05395 (ACNR93_05395) - 1077428..1077931 (-) 504 WP_420543268.1 GNAT family N-acetyltransferase -
  ACNR93_RS05400 (ACNR93_05400) gdhA 1078084..1079433 (-) 1350 WP_021142476.1 NADP-specific glutamate dehydrogenase -
  ACNR93_RS05405 (ACNR93_05405) - 1079664..1080161 (+) 498 WP_420543269.1 DUF308 domain-containing protein -
  ACNR93_RS05410 (ACNR93_05410) queF 1080200..1080691 (-) 492 WP_021142478.1 preQ(1) synthase -
  ACNR93_RS05415 (ACNR93_05415) queE 1080707..1081420 (-) 714 WP_420543270.1 7-carboxy-7-deazaguanine synthase QueE -
  ACNR93_RS05420 (ACNR93_05420) queD 1081413..1081859 (-) 447 WP_420543271.1 6-carboxytetrahydropterin synthase QueD -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17039.52 Da        Isoelectric Point: 6.8883

>NTDB_id=988906 ACNR93_RS05385 WP_420543266.1 1076427..1076867(-) (rcrR) [Streptococcus equinus strain NM-2-29]
MRDKDPFSQLRDFVNLMENRVHELGELHDVENLAGPQGFAVLYLRDNEDKEVFIKDIERKLKISKSVTSNLIKRMEKNGF
IEVVPSEVDKRYKRVVLTELGRAKTKDIDAFHAAVHKQIFDGISREELEISGRVFDRILKNLENKE

Nucleotide


Download         Length: 441 bp        

>NTDB_id=988906 ACNR93_RS05385 WP_420543266.1 1076427..1076867(-) (rcrR) [Streptococcus equinus strain NM-2-29]
ATGCGAGATAAAGATCCGTTTTCACAATTAAGAGACTTCGTTAATTTGATGGAAAACCGTGTGCACGAACTCGGTGAACT
TCATGATGTGGAGAACTTAGCTGGTCCGCAGGGATTTGCGGTTTTATATCTGAGAGATAATGAAGACAAAGAAGTTTTCA
TTAAAGATATTGAACGCAAGCTTAAAATTTCAAAATCAGTAACCAGCAATTTGATTAAAAGAATGGAAAAGAATGGTTTT
ATAGAAGTTGTTCCATCTGAAGTTGATAAGCGTTACAAGCGTGTAGTGCTTACAGAACTTGGCCGAGCTAAGACAAAAGA
TATTGATGCTTTTCACGCTGCGGTTCACAAGCAAATTTTTGATGGCATTAGTCGTGAAGAGCTAGAAATTTCTGGTCGTG
TCTTTGATCGTATTTTGAAAAATTTAGAAAACAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(35-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

52.448

97.945

0.514