Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACNR93_RS05380 Genome accession   NZ_CP184736
Coordinates   1074609..1076423 (-) Length   604 a.a.
NCBI ID   WP_420543265.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1069609..1081423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS05365 (ACNR93_05365) - 1069819..1070736 (-) 918 WP_420543262.1 glycine betaine ABC transporter substrate-binding protein -
  ACNR93_RS05370 (ACNR93_05370) - 1070868..1072739 (-) 1872 WP_420543263.1 hypothetical protein -
  ACNR93_RS05375 (ACNR93_05375) rcrQ 1072847..1074619 (-) 1773 WP_420543264.1 ABC transporter ATP-binding protein Regulator
  ACNR93_RS05380 (ACNR93_05380) rcrP 1074609..1076423 (-) 1815 WP_420543265.1 ABC transporter ATP-binding protein Regulator
  ACNR93_RS05385 (ACNR93_05385) rcrR 1076427..1076867 (-) 441 WP_420543266.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ACNR93_RS05390 (ACNR93_05390) - 1077015..1077425 (-) 411 WP_420543267.1 peptide deformylase -
  ACNR93_RS05395 (ACNR93_05395) - 1077428..1077931 (-) 504 WP_420543268.1 GNAT family N-acetyltransferase -
  ACNR93_RS05400 (ACNR93_05400) gdhA 1078084..1079433 (-) 1350 WP_021142476.1 NADP-specific glutamate dehydrogenase -
  ACNR93_RS05405 (ACNR93_05405) - 1079664..1080161 (+) 498 WP_420543269.1 DUF308 domain-containing protein -
  ACNR93_RS05410 (ACNR93_05410) queF 1080200..1080691 (-) 492 WP_021142478.1 preQ(1) synthase -
  ACNR93_RS05415 (ACNR93_05415) queE 1080707..1081420 (-) 714 WP_420543270.1 7-carboxy-7-deazaguanine synthase QueE -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67034.87 Da        Isoelectric Point: 6.7765

>NTDB_id=988905 ACNR93_RS05380 WP_420543265.1 1074609..1076423(-) (rcrP) [Streptococcus equinus strain NM-2-29]
MLKIFKRLTAKEVAMIIIAVLFVCLNVFLDLKIPDYMSDITSLLSTQGTKAKDIFAWNFDAPGMRMVLLSLGSFAASVVV
GFLAARIAASFSTRLRDDIFHSVLDYSDAEIKKFSIPSLLTRTTNDITQIQLVFTMGLQVVTKGPIMAIWAITKIADKNH
EWLMVLVVAVAVMIFMLAFLLMMVMPKQRMIQKLTDKLNSITRESLSGIRVVRAYNAESYQDGKFEKANNDVTNLNLFIG
RSMSLMSPVMTSISSGMTLAIYWIGAFLIEDIAIPKDPTKIASAMQDKVNIFSDMVVYSSYAMQVVIGFMMMIAVFFILP
RAVVAAGRINEVLDTKSSVIYPEESKVQPKEKGSVEFDNVSFRYSKNSEAVLEHVSFKAKAGDTVAFIGSTGSGKSTLVN
LIPRFYDATEGTIKVDGVNVRDYDHDTLHKIVGYIPQKAVLFSGDITSNMNMGDSNSSPLDDDKIWEALDLAQGRDFVES
KEGQLKAPVSQGGQNFSGGQKQRLAIARALARKPEIIIFDDSFSALDYKTDRILRSQLKERTANMTKLIVAQRISTIMDA
DQILVLDEGKVVGQGTHEELLANNEVYREIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=988905 ACNR93_RS05380 WP_420543265.1 1074609..1076423(-) (rcrP) [Streptococcus equinus strain NM-2-29]
ATGTTAAAAATTTTTAAACGATTAACGGCAAAAGAAGTCGCTATGATAATTATTGCCGTACTATTTGTGTGTTTGAATGT
TTTCTTGGATTTGAAAATCCCTGATTACATGTCAGATATCACATCCTTGCTATCAACTCAAGGAACAAAAGCGAAAGATA
TATTTGCTTGGAATTTTGATGCCCCTGGAATGCGTATGGTCTTGCTTTCTTTAGGAAGTTTTGCAGCATCTGTGGTTGTC
GGTTTCTTAGCGGCACGTATTGCAGCAAGTTTCAGTACTCGTCTGCGTGATGATATTTTCCATAGTGTTTTAGACTATTC
GGATGCCGAAATCAAGAAGTTTTCAATTCCAAGTCTTTTGACACGTACAACGAATGATATTACTCAAATTCAATTAGTCT
TCACAATGGGACTTCAAGTTGTTACTAAAGGCCCGATTATGGCGATTTGGGCAATTACCAAGATTGCTGATAAGAACCAT
GAATGGTTAATGGTACTTGTTGTGGCGGTTGCAGTCATGATTTTCATGCTTGCTTTCCTTCTTATGATGGTAATGCCAAA
ACAACGTATGATTCAAAAACTTACTGATAAACTAAACAGTATTACACGTGAATCATTAAGTGGTATTCGTGTTGTTCGAG
CTTACAACGCTGAAAGCTACCAAGATGGTAAATTCGAAAAGGCAAATAACGATGTCACAAATCTTAACCTTTTCATTGGA
CGTTCAATGTCATTGATGTCACCAGTAATGACAAGTATTTCAAGTGGTATGACATTAGCGATTTACTGGATTGGTGCCTT
CTTGATTGAAGATATTGCTATTCCAAAAGATCCGACAAAAATTGCAAGCGCTATGCAAGACAAGGTGAACATTTTCTCTG
ATATGGTGGTTTATTCATCATATGCCATGCAAGTTGTTATCGGATTTATGATGATGATTGCTGTGTTCTTCATCTTGCCA
CGTGCGGTTGTAGCAGCTGGTCGTATCAACGAAGTTTTGGATACAAAATCATCTGTAATTTATCCTGAAGAAAGTAAAGT
TCAGCCAAAAGAAAAAGGTTCTGTAGAATTTGACAATGTTTCATTCCGATACAGTAAAAATTCTGAGGCTGTCCTAGAAC
ATGTTTCTTTCAAAGCTAAAGCTGGTGATACTGTTGCCTTTATTGGGTCAACTGGTTCAGGTAAATCAACCTTAGTGAAC
TTGATTCCACGTTTCTACGATGCGACGGAAGGAACAATCAAGGTTGATGGTGTCAATGTTCGTGATTACGACCATGATAC
GCTTCATAAGATTGTCGGATACATTCCACAAAAAGCAGTTCTCTTTAGCGGAGACATCACTTCTAATATGAATATGGGTG
ACAGCAATAGCTCACCACTTGATGATGATAAAATCTGGGAAGCTCTTGACTTGGCTCAAGGTAGAGACTTTGTTGAAAGT
AAAGAAGGCCAGCTAAAAGCACCCGTTTCTCAAGGCGGTCAGAACTTCTCAGGCGGCCAAAAACAGCGTTTGGCAATTGC
GCGTGCTCTTGCACGTAAACCAGAAATCATTATCTTTGATGATTCATTCTCTGCGCTTGACTACAAGACTGACCGAATTC
TTCGTTCACAATTGAAAGAACGCACAGCCAACATGACAAAATTGATTGTTGCTCAACGTATTTCGACAATCATGGACGCT
GACCAAATCTTGGTTCTTGACGAAGGTAAAGTTGTTGGTCAAGGTACTCATGAAGAACTTCTTGCAAACAACGAAGTTTA
CCGTGAAATTGCCTACTCACAATTATCTAAGGAGGAATTAGAAAATGGAAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-270)

ABC transporter (ABC_tran)

(372-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

67.769

100

0.679