Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ACNR93_RS02050 Genome accession   NZ_CP184736
Coordinates   385403..386437 (+) Length   344 a.a.
NCBI ID   WP_420543778.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 380403..391437
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS02020 (ACNR93_02020) tsaE 381688..382131 (+) 444 WP_044023456.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACNR93_RS02025 (ACNR93_02025) - 382124..382636 (+) 513 WP_420543776.1 GNAT family N-acetyltransferase -
  ACNR93_RS02030 (ACNR93_02030) brpA 382647..383810 (+) 1164 WP_134775902.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACNR93_RS02035 (ACNR93_02035) - 383881..384195 (-) 315 WP_074567230.1 hypothetical protein -
  ACNR93_RS02040 (ACNR93_02040) - 384192..384611 (-) 420 WP_074480785.1 HIT family protein -
  ACNR93_RS02045 (ACNR93_02045) pptA 384675..385400 (+) 726 WP_420543777.1 ABC transporter ATP-binding protein Regulator
  ACNR93_RS02050 (ACNR93_02050) pptB 385403..386437 (+) 1035 WP_420543778.1 ABC transporter permease Regulator
  ACNR93_RS02055 (ACNR93_02055) ccrZ 386471..387304 (+) 834 WP_045798213.1 cell cycle regulator CcrZ -
  ACNR93_RS02060 (ACNR93_02060) trmB 387304..387942 (+) 639 WP_021141720.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACNR93_RS02070 (ACNR93_02070) - 388244..389203 (+) 960 WP_420543779.1 diguanylate cyclase -
  ACNR93_RS02075 (ACNR93_02075) - 389209..390276 (+) 1068 WP_420543780.1 glycosyltransferase -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40011.52 Da        Isoelectric Point: 10.4133

>NTDB_id=988865 ACNR93_RS02050 WP_420543778.1 385403..386437(+) (pptB) [Streptococcus equinus strain NM-2-29]
MKEVFQKRRRLFLGQCLKYLRYVLNDHFVLVLFFLLGFLMFQYGKLLQHFPKNVIWLEIILAFVALAMLSLGKIATYIEA
PDKLFYLPKEEEVVSLIHQARIRSFGIWTVIQTVVLILLAPIFFKLGMSLAIFIVLVIVLAVLKWFVMTEKEKVFFKDGH
FSWEKAINYESKRRQGILKFFALFTTVKGISASVKRRAYLDKLLLLVKKTHAKTWSNLYLRAFLRSSDYLALTLRLSLLS
ILALLFVPNHLVAAGLALVFNYLLLFQLLSLAQHFDYQYLTRLYPISETQKKANLKAFLRCLSYLISLIELVLCFSLKAA
GLIILVTVIVTEWYLPYKIAKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=988865 ACNR93_RS02050 WP_420543778.1 385403..386437(+) (pptB) [Streptococcus equinus strain NM-2-29]
ATGAAAGAAGTTTTTCAAAAACGACGTCGCCTCTTTTTAGGGCAATGTCTGAAGTATTTACGATATGTCTTAAATGACCA
TTTTGTTTTAGTGCTGTTTTTCTTGCTTGGATTTTTGATGTTTCAGTATGGGAAATTATTGCAGCATTTTCCCAAAAATG
TCATTTGGCTAGAAATCATTTTAGCTTTTGTTGCGCTTGCTATGCTTAGCCTTGGAAAAATTGCGACTTATATTGAGGCA
CCGGATAAGTTGTTTTATCTTCCTAAGGAAGAAGAAGTTGTAAGCCTGATTCATCAAGCACGCATTCGTTCATTTGGTAT
TTGGACGGTGATTCAGACAGTTGTGCTGATTTTATTGGCACCGATTTTCTTCAAATTGGGAATGTCACTAGCTATTTTTA
TTGTATTGGTGATTGTTTTAGCTGTTCTGAAATGGTTTGTGATGACAGAAAAGGAAAAAGTCTTTTTTAAAGATGGACAT
TTTTCATGGGAAAAAGCTATTAATTATGAATCGAAACGTCGTCAAGGAATCTTGAAGTTCTTTGCTCTCTTTACAACTGT
TAAAGGTATTTCAGCTAGCGTAAAACGTCGTGCCTATCTTGATAAATTGCTACTTTTAGTTAAGAAGACACATGCTAAAA
CATGGTCAAACTTGTACCTTCGTGCTTTTCTTCGCAGCTCGGATTATTTAGCGTTAACTTTGCGTTTATCACTACTAAGT
ATTTTAGCTTTGCTATTTGTTCCAAATCATTTAGTAGCAGCAGGTCTTGCACTTGTTTTTAACTACCTTTTACTCTTTCA
GCTATTGAGTTTAGCCCAACATTTTGATTATCAATATTTAACACGTTTATACCCAATATCAGAAACACAGAAAAAGGCTA
ATCTAAAGGCATTTTTGAGATGTTTATCTTATTTGATTAGTTTAATTGAGCTTGTTTTATGCTTCTCATTGAAAGCAGCA
GGTCTTATCATTTTAGTGACTGTAATTGTTACAGAATGGTATCTTCCTTACAAAATCGCGAAGATGATTGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.957

100

0.471

  pptB Streptococcus salivarius strain HSISS4

45.507

100

0.456