Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AAGQ88_RS01395 Genome accession   NZ_CP152388
Coordinates   308667..309077 (+) Length   136 a.a.
NCBI ID   WP_268798442.1    Uniprot ID   -
Organism   Pseudomonas sp. F3-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 303667..314077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAGQ88_RS01370 (AAGQ88_01370) pyrR 304331..304852 (-) 522 WP_093468260.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AAGQ88_RS01375 (AAGQ88_01375) ruvX 304943..305383 (-) 441 WP_342654242.1 Holliday junction resolvase RuvX -
  AAGQ88_RS01380 (AAGQ88_01380) - 305383..305952 (-) 570 WP_093468266.1 YqgE/AlgH family protein -
  AAGQ88_RS01385 (AAGQ88_01385) - 306300..307202 (-) 903 WP_342654243.1 energy transducer TonB -
  AAGQ88_RS01390 (AAGQ88_01390) gshB 307447..308400 (-) 954 WP_285423551.1 glutathione synthase -
  AAGQ88_RS01395 (AAGQ88_01395) pilG 308667..309077 (+) 411 WP_268798442.1 twitching motility response regulator PilG Regulator
  AAGQ88_RS01400 (AAGQ88_01400) pilH 309124..309489 (+) 366 WP_093468272.1 twitching motility response regulator PilH -
  AAGQ88_RS01405 (AAGQ88_01405) - 309506..310045 (+) 540 WP_093468275.1 chemotaxis protein CheW -
  AAGQ88_RS01410 (AAGQ88_01410) - 310103..312139 (+) 2037 WP_285423550.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15044.57 Da        Isoelectric Point: 8.5257

>NTDB_id=988827 AAGQ88_RS01395 WP_268798442.1 308667..309077(+) (pilG) [Pseudomonas sp. F3-2]
MEQHSAPLKVMVIDDSRTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAVEQQLS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=988827 AAGQ88_RS01395 WP_268798442.1 308667..309077(+) (pilG) [Pseudomonas sp. F3-2]
ATGGAACAGCATTCAGCCCCATTGAAAGTGATGGTCATCGACGACTCTCGAACGATTCGTCGCACCGCCGAGACCCTGTT
GAAAAACGTCGGTTGTGAAGTGATCACTGCCATAGACGGTTTCGATGCGCTGGCCAAGATCGCCGATAATCATCCGAGAA
TCATATTTGTCGACATCATGATGCCCAGGCTGGATGGGTATCAGACCTGTGCGTTGATCAAGAACAACCGGGCGTTCAAG
TCCACGCCGGTGATCATGTTGTCCTCCAAGGACGGGCTGTTCGACAAAGCCAAGGGGCGAATCGTCGGGTCCGATCAGTT
TTTGACCAAGCCGTTTAGCAAGGAAGAGCTGCTCAGTGCAATCAAGGCCCACGTGCCGGGGTTCGTTGCAGTAGAACAAC
AATTATCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

91.912

0.684

Multiple sequence alignment