Detailed information NTG0988747

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AAGF34_RS14560
• Genome accession: NZ_CP152376
• Coordinates: 3117369..3118445 (-)
• Length: 358 a.a.
• NCBI ID: WP_342616447.1
• Uniprot ID: -
• Organism: Rhodoferax sp. GW822-FHT02A01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3112369..3123445

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAGF34_RS14540 (AAGF34_14540)	-	3112457..3114136 (-)	1680	WP_342616443.1	ABC transporter permease	-
AAGF34_RS14545 (AAGF34_14545)	-	3114155..3115438 (-)	1284	WP_342616444.1	Hsp70 family protein	-
AAGF34_RS14550 (AAGF34_14550)	-	3115435..3116115 (-)	681	WP_342616445.1	carboxylesterase	-
AAGF34_RS14555 (AAGF34_14555)	-	3116147..3117361 (-)	1215	WP_342616446.1	ABC transporter substrate-binding protein	-
AAGF34_RS14560 (AAGF34_14560)	pilA	3117369..3118445 (-)	1077	WP_342616447.1	signal recognition particle-docking protein FtsY	Machinery gene
AAGF34_RS14565 (AAGF34_14565)	-	3118475..3119902 (+)	1428	WP_342616448.1	pitrilysin family protein	-
AAGF34_RS14570 (AAGF34_14570)	-	3119926..3121269 (+)	1344	WP_342616449.1	pitrilysin family protein	-
AAGF34_RS14575 (AAGF34_14575)	-	3121367..3122005 (+)	639	WP_342621101.1	hypothetical protein	-
AAGF34_RS14580 (AAGF34_14580)	rsmD	3122180..3122815 (+)	636	WP_342616450.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AAGF34_RS14585 (AAGF34_14585)	coaD	3122872..3123360 (+)	489	WP_342616451.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 37205.88 Da
• Isoelectric Point: 8.4597

>NTDB_id=988747 AAGF34_RS14560 WP_342616447.1 3117369..3118445(-) (pilA) [Rhodoferax sp. GW822-FHT02A01]
MFSFFKKKSPPAPVAAPAAVPDGSAAPVQPAAAGTQIGSALAAPVPVPDAIAAPVAPKPERQKWLDRLKAGLGKTASSLS
GVFGGNKVDEALFEELESALLMADAGVSATQFLTDNLRKKAKSSNLTNPVALKNQLIADLTELLQPLQKPLVIGQQTPTV
IMVAGVNGAGKTTSIGKLTRHLSEEGASVLLAAADTFRAAAREQLSIWADRNTVEIISQAGADPAAVSFDAVSAGKARGK
DVVLIDTAGRLPTQLHLMEELKKIKRVIQKADVSAPHEVLLVIDGNTGQNAVAQVKAFDDALGLTGLIVTKLDGTAKGGV
LAAIARDRPIPVYFIGVGEQLNELETFNAREFAQALLA

Nucleotide

• Length: 1077 bp

>NTDB_id=988747 AAGF34_RS14560 WP_342616447.1 3117369..3118445(-) (pilA) [Rhodoferax sp. GW822-FHT02A01]
ATGTTCAGTTTTTTCAAGAAAAAATCCCCCCCCGCTCCGGTTGCCGCCCCTGCTGCAGTACCTGATGGCAGCGCCGCGCC
AGTCCAGCCTGCGGCTGCTGGCACACAAATCGGCAGTGCCTTGGCAGCACCGGTACCGGTGCCCGATGCGATTGCGGCAC
CTGTTGCACCCAAGCCCGAACGCCAGAAATGGCTGGACCGTCTCAAGGCTGGTCTGGGCAAGACCGCCAGCAGCCTCTCA
GGCGTGTTTGGCGGCAACAAGGTAGACGAAGCCCTGTTTGAAGAACTGGAAAGCGCCCTGCTGATGGCCGACGCGGGTGT
GTCTGCCACCCAGTTCCTCACCGACAACCTGCGCAAGAAAGCCAAGTCTTCCAACCTGACCAACCCGGTAGCTCTGAAGA
ACCAGCTGATTGCCGATCTGACCGAGCTGCTGCAGCCTCTGCAAAAGCCACTGGTGATAGGCCAGCAGACGCCCACCGTC
ATCATGGTGGCGGGGGTGAATGGCGCAGGCAAGACCACCTCCATCGGCAAGCTCACGCGCCACCTGTCGGAAGAAGGCGC
CAGCGTGCTGCTGGCCGCAGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCAGCATCTGGGCCGACCGCAACACGG
TGGAGATCATCAGCCAGGCGGGCGCCGACCCGGCAGCCGTGAGCTTTGACGCCGTATCCGCCGGCAAGGCACGCGGCAAG
GACGTGGTACTGATCGACACGGCGGGCCGCCTGCCGACGCAGCTGCACCTGATGGAAGAGCTGAAAAAAATCAAGCGCGT
GATCCAGAAGGCCGACGTGAGTGCGCCGCACGAAGTGCTGCTGGTGATTGATGGCAACACCGGCCAGAACGCGGTGGCGC
AGGTCAAGGCCTTTGATGACGCGCTGGGGCTGACCGGGCTGATCGTCACCAAGCTTGACGGCACGGCCAAAGGCGGCGTG
CTGGCGGCCATTGCACGCGACAGGCCCATCCCGGTGTACTTCATCGGTGTGGGCGAACAGCTCAACGAGCTAGAGACCTT
CAATGCCCGCGAATTTGCGCAGGCCCTGCTCGCTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (158-357)

• SRP54-type protein, helical bundle domain (SRP54_N) (77-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	60.535	83.52	0.506