Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | WN937_RS13525 | Genome accession | NZ_CP152363 |
| Coordinates | 2865329..2865943 (+) | Length | 204 a.a. |
| NCBI ID | WP_005479697.1 | Uniprot ID | - |
| Organism | Vibrio parahaemolyticus strain vp-HL-201910 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2860329..2870943
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WN937_RS13505 (WN937_13505) | - | 2860614..2861531 (-) | 918 | WP_005462584.1 | ABC transporter ATP-binding protein | - |
| WN937_RS13510 (WN937_13510) | - | 2861784..2863454 (-) | 1671 | WP_069536421.1 | SulP family inorganic anion transporter | - |
| WN937_RS13515 (WN937_13515) | can | 2863738..2864406 (+) | 669 | WP_005462578.1 | carbonate dehydratase | - |
| WN937_RS13520 (WN937_13520) | hpt | 2864480..2865010 (-) | 531 | WP_005479701.1 | hypoxanthine phosphoribosyltransferase | - |
| WN937_RS13525 (WN937_13525) | opaR | 2865329..2865943 (+) | 615 | WP_005479697.1 | transcriptional regulator OpaR | Regulator |
| WN937_RS13530 (WN937_13530) | lpdA | 2866071..2867498 (-) | 1428 | WP_005479684.1 | dihydrolipoyl dehydrogenase | - |
| WN937_RS13535 (WN937_13535) | aceF | 2867767..2869653 (-) | 1887 | WP_031847487.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23634.94 Da Isoelectric Point: 6.0781
>NTDB_id=988669 WN937_RS13525 WP_005479697.1 2865329..2865943(+) (opaR) [Vibrio parahaemolyticus strain vp-HL-201910]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSE
HLANLFHGICYSLFVQANRFKGEAELKELVSAYLDMLCIYNREH
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHDSE
HLANLFHGICYSLFVQANRFKGEAELKELVSAYLDMLCIYNREH
Nucleotide
Download Length: 615 bp
>NTDB_id=988669 WN937_RS13525 WP_005479697.1 2865329..2865943(+) (opaR) [Vibrio parahaemolyticus strain vp-HL-201910]
ATGGACTCAATTGCAAAGAGACCTAGAACTAGGCTTTCTCCTCTTAAACGTAAGCAACAACTCATGGAAATCGCGTTAGA
AGTATTTGCACGCCGTGGTATTGGCCGTGGTGGTCACGCAGATATTGCTGAAATTGCGCAAGTGTCTGTTGCAACCGTTT
TTAACTACTTCCCAACTCGCGAAGATTTGGTTGATGAAGTTCTCAACCATGTTGTCCGTCAGTTCTCGAATTTCCTTTCG
GACAATATCGACCTAGACATACACGCTCGTGAAAACATCGCAAACATCACCAATGCGATGATCGAGCTTGTAAGCCAAGA
TTGTCACTGGCTGAAAGTTTGGTTCGAGTGGAGCGCATCAACTCGTGATGAAGTTTGGCCTCTATTTGTGTCTACCAACC
GCACTAACCAATTACTGGTTCAAAACATGTTCATTAAAGCGATTGAACGCGGTGAAGTGTGTGATCAACACGATTCAGAA
CACTTGGCAAATCTATTCCACGGTATTTGTTACTCGCTGTTCGTACAAGCAAACCGCTTCAAAGGTGAAGCCGAGTTGAA
GGAACTCGTGAGCGCTTACCTAGATATGCTTTGCATCTACAATCGCGAACACTAA
ATGGACTCAATTGCAAAGAGACCTAGAACTAGGCTTTCTCCTCTTAAACGTAAGCAACAACTCATGGAAATCGCGTTAGA
AGTATTTGCACGCCGTGGTATTGGCCGTGGTGGTCACGCAGATATTGCTGAAATTGCGCAAGTGTCTGTTGCAACCGTTT
TTAACTACTTCCCAACTCGCGAAGATTTGGTTGATGAAGTTCTCAACCATGTTGTCCGTCAGTTCTCGAATTTCCTTTCG
GACAATATCGACCTAGACATACACGCTCGTGAAAACATCGCAAACATCACCAATGCGATGATCGAGCTTGTAAGCCAAGA
TTGTCACTGGCTGAAAGTTTGGTTCGAGTGGAGCGCATCAACTCGTGATGAAGTTTGGCCTCTATTTGTGTCTACCAACC
GCACTAACCAATTACTGGTTCAAAACATGTTCATTAAAGCGATTGAACGCGGTGAAGTGTGTGATCAACACGATTCAGAA
CACTTGGCAAATCTATTCCACGGTATTTGTTACTCGCTGTTCGTACAAGCAAACCGCTTCAAAGGTGAAGCCGAGTTGAA
GGAACTCGTGAGCGCTTACCTAGATATGCTTTGCATCTACAATCGCGAACACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
100 |
100 |
1 |
| hapR | Vibrio cholerae C6706 |
72.222 |
97.059 |
0.701 |
| hapR | Vibrio cholerae strain A1552 |
72.222 |
97.059 |
0.701 |