Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   AAC934_RS19280 Genome accession   NZ_CP152362
Coordinates   3738353..3738472 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain LP     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3733353..3743472
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC934_RS19255 (AAC934_19255) albG 3733513..3734214 (+) 702 WP_069703620.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  AAC934_RS19260 (AAC934_19260) ywhL 3734220..3735596 (-) 1377 WP_069703619.1 YncE family protein -
  AAC934_RS19265 (AAC934_19265) ywhK 3735639..3736994 (-) 1356 WP_342623924.1 YncE family protein -
  AAC934_RS19270 (AAC934_19270) - 3736991..3737221 (-) 231 WP_009968328.1 hypothetical protein -
  AAC934_RS19275 (AAC934_19275) rapF 3737224..3738369 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  AAC934_RS19280 (AAC934_19280) phrF 3738353..3738472 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  AAC934_RS19285 (AAC934_19285) - 3738725..3739204 (+) 480 WP_038427994.1 hypothetical protein -
  AAC934_RS19290 (AAC934_19290) - 3739353..3740141 (+) 789 WP_015714893.1 membrane protein -
  AAC934_RS19295 (AAC934_19295) - 3740128..3740802 (+) 675 WP_015714894.1 hypothetical protein -
  AAC934_RS19300 (AAC934_19300) - 3740812..3741609 (+) 798 WP_231573542.1 hypothetical protein -
  AAC934_RS19305 (AAC934_19305) - 3741612..3742259 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  AAC934_RS19310 (AAC934_19310) - 3742252..3742812 (+) 561 WP_015714897.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=988649 AAC934_RS19280 WP_009968329.1 3738353..3738472(+) (phrF) [Bacillus subtilis strain LP]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=988649 AAC934_RS19280 WP_009968329.1 3738353..3738472(+) (phrF) [Bacillus subtilis strain LP]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment