Detailed information NTG0988450

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: AAG562_RS17050
• Genome accession: NZ_CP152340
• Coordinates: 3715249..3717474 (-)
• Length: 741 a.a.
• NCBI ID: WP_003283694.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain NCIMB_885
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3710249..3722474

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAG562_RS17015 (AAG562_17015)	murB	3710642..3711661 (-)	1020	WP_003283684.1	UDP-N-acetylmuramate dehydrogenase	-
AAG562_RS17020 (AAG562_17020)	-	3711658..3712122 (-)	465	WP_003283686.1	low molecular weight protein-tyrosine-phosphatase	-
AAG562_RS17025 (AAG562_17025)	kdsB	3712124..3712888 (-)	765	WP_003283687.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AAG562_RS17030 (AAG562_17030)	-	3712885..3713070 (-)	186	WP_003283689.1	Trm112 family protein	-
AAG562_RS17035 (AAG562_17035)	lpxK	3713116..3714120 (-)	1005	WP_003283690.1	tetraacyldisaccharide 4'-kinase	-
AAG562_RS17040 (AAG562_17040)	-	3714120..3714548 (-)	429	WP_003283692.1	biopolymer transporter ExbD	-
AAG562_RS17045 (AAG562_17045)	-	3714545..3715177 (-)	633	WP_003283693.1	MotA/TolQ/ExbB proton channel family protein	-
AAG562_RS17050 (AAG562_17050)	comA	3715249..3717474 (-)	2226	WP_003283694.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AAG562_RS17055 (AAG562_17055)	-	3717624..3718139 (+)	516	WP_003283695.1	DUF2062 domain-containing protein	-
AAG562_RS17060 (AAG562_17060)	-	3718147..3719391 (-)	1245	WP_003283696.1	lipoprotein-releasing ABC transporter permease subunit	-
AAG562_RS17065 (AAG562_17065)	lolD	3719391..3720089 (-)	699	WP_003283698.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
AAG562_RS17070 (AAG562_17070)	-	3720097..3721344 (-)	1248	WP_003283699.1	lipoprotein-releasing ABC transporter permease subunit	-
AAG562_RS17075 (AAG562_17075)	-	3721436..3722014 (+)	579	WP_003283700.1	PilZ domain-containing protein	-
AAG562_RS17080 (AAG562_17080)	-	3722018..3722326 (+)	309	WP_003283702.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80483.25 Da
• Isoelectric Point: 10.2162

>NTDB_id=988450 AAG562_RS17050 WP_003283694.1 3715249..3717474(-) (comA) [Stutzerimonas stutzeri strain NCIMB_885]
MRTWMLALAAGLVLPRFLPALPAAWGWLALAALGCVLLVRRRWAALGLFLLGFSWACFQSQSAMDDRLPVSKDGRTFWIE
GTVVGLPVSADNVVRFELEDIDSRHDGLPSKVRLSWYGGPTLQAGERWRLAARLKRPRGLVNPQSFDYEAWLLARRIGAT
GTVKAGERLLMPAATEGWRDRLRARLMAIPASGRQGAIAALVVGDDSGLSRSDWQVLQNTGTVHLMVISGQHIGILAGML
YGLIALLARSGLWPRRVPWLPWACGLALTGALAYGWLAGFDVPVRRACLMVAVVLLWRLRFRHLGVWQPLLLALNGVLLI
DPLVTLQPGFWLSFGAVAVLALVFSGRLGQWAWWKALVRAQWAAAIGLLPLLLALGLPVSASGPLANLIAVPWVSLTVPF
ALLGTVLLPLGGVGETLLLAVGWCLALLFELLTIISGWQPAWLAGGLSFWAWALIALGVLLLLMPSGLPLRALGLIVLLP
LAFPPSASVSDGQAQVWMLDVGQGLSVLVRTRKHALLYDAGPSQGDFDMGERVVFPSLRALGVDGLNMLLLSHADNDHAG
GAQAIQRLMPVHSVVSGEPQRHPAGLNAEMCENGAEWQWDNVRFRLWHWQAAGDSNQRSCVLLVEANGERVLLTGDIDQA
AERALLLSGPAVQAQWLLLPHHGSRSSSSEPFLRAVGPTAALISRSLHNAFGHPHPNVIARLEALGIESYDTALHGAVRI
DLGRFSPAQVQRAERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=988450 AAG562_RS17050 WP_003283694.1 3715249..3717474(-) (comA) [Stutzerimonas stutzeri strain NCIMB_885]
ATGCGCACATGGATGCTGGCGCTCGCCGCTGGTCTCGTCCTGCCACGTTTCTTGCCAGCACTACCTGCCGCCTGGGGCTG
GTTGGCGCTTGCTGCCCTAGGCTGTGTGCTCCTTGTAAGAAGGCGCTGGGCGGCGCTGGGGCTTTTTCTTCTGGGTTTCT
CCTGGGCATGCTTTCAGAGCCAGAGCGCCATGGACGATCGCCTGCCCGTATCGAAGGACGGCCGGACGTTCTGGATCGAA
GGGACAGTGGTCGGCTTGCCCGTCAGCGCCGATAACGTGGTCCGGTTCGAGCTGGAGGACATCGACTCACGGCATGACGG
GCTGCCGTCCAAAGTACGACTGTCCTGGTATGGCGGCCCGACACTGCAAGCTGGGGAGCGCTGGCGGCTTGCCGCGAGAC
TGAAGCGTCCACGCGGTCTGGTCAATCCGCAGTCGTTCGATTACGAAGCCTGGCTGTTGGCGCGGCGAATAGGCGCAACT
GGCACCGTCAAGGCCGGCGAGCGCCTCTTGATGCCGGCGGCGACCGAAGGTTGGCGCGACCGGTTGAGAGCCCGCTTGAT
GGCCATTCCTGCCTCTGGGCGGCAGGGTGCGATCGCTGCACTGGTGGTAGGCGATGATTCCGGTTTGAGTCGAAGCGATT
GGCAGGTGTTGCAGAACACCGGCACGGTGCACCTGATGGTCATTTCCGGGCAGCACATCGGCATCCTGGCCGGGATGCTG
TATGGGCTGATCGCGCTGTTGGCGCGCTCAGGTCTTTGGCCGCGACGGGTGCCATGGCTACCCTGGGCGTGCGGTCTCGC
GCTTACCGGTGCGCTGGCATACGGCTGGCTGGCCGGGTTCGATGTTCCGGTACGGCGTGCCTGTCTCATGGTCGCTGTGG
TCCTGCTCTGGCGCTTGCGCTTTCGCCATCTGGGAGTCTGGCAGCCCCTGTTGTTGGCGCTCAACGGCGTCCTGCTGATC
GACCCGCTGGTTACGCTGCAGCCGGGCTTTTGGCTGTCCTTTGGTGCAGTGGCGGTGCTGGCGCTTGTGTTTTCTGGACG
TCTGGGTCAATGGGCCTGGTGGAAAGCGTTGGTACGTGCGCAGTGGGCGGCCGCCATCGGCTTGCTGCCACTTCTATTGG
CCCTGGGGCTGCCGGTGAGTGCCAGCGGTCCGTTGGCCAATCTCATTGCCGTACCCTGGGTGAGTTTGACCGTGCCCTTT
GCCTTGCTGGGCACTGTGTTGCTGCCGTTAGGGGGAGTTGGTGAGACGTTGCTGTTGGCGGTCGGCTGGTGCCTGGCGCT
GCTGTTTGAGCTGTTGACGATTATTTCGGGTTGGCAGCCCGCATGGCTGGCTGGCGGTCTTTCATTCTGGGCATGGGCCT
TGATCGCGCTAGGTGTTCTTCTGCTGTTGATGCCCTCCGGACTGCCGTTGCGTGCGCTTGGGCTGATAGTGCTGCTGCCG
CTGGCATTTCCTCCGTCGGCATCAGTATCTGACGGGCAGGCACAGGTATGGATGCTGGACGTGGGGCAGGGGCTTTCGGT
ATTGGTGCGAACCCGAAAGCATGCGCTGCTCTACGATGCCGGGCCGAGCCAAGGCGACTTCGACATGGGTGAGCGCGTGG
TCTTTCCTTCACTGCGAGCACTCGGGGTAGATGGGCTGAACATGCTGCTGCTCAGCCATGCCGACAACGACCACGCTGGT
GGTGCGCAGGCTATTCAGCGTTTGATGCCGGTTCATAGTGTCGTCAGTGGCGAGCCGCAACGACATCCCGCCGGCCTCAA
CGCGGAGATGTGCGAAAACGGTGCCGAGTGGCAGTGGGATAACGTGCGCTTCAGGTTGTGGCATTGGCAGGCGGCAGGCG
ATAGCAACCAGAGGTCATGCGTTCTGCTCGTGGAGGCGAACGGAGAAAGGGTTCTGCTTACCGGCGATATCGATCAGGCG
GCGGAGCGGGCATTGCTGCTGAGCGGGCCGGCGGTGCAGGCGCAGTGGCTGTTGCTGCCGCATCACGGCAGCCGAAGCTC
CTCGTCGGAGCCGTTTTTACGTGCTGTTGGGCCTACAGCTGCGCTGATCTCCCGCAGCCTGCACAATGCGTTCGGGCATC
CACACCCGAATGTCATCGCCCGTCTGGAGGCTCTTGGTATCGAGTCGTATGACACCGCCCTGCATGGTGCCGTCCGGATC
GATCTTGGCCGCTTCTCTCCTGCACAGGTGCAGCGCGCAGAACGTCGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Competence protein (Competence) (201-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.389	97.166	0.645
comA	Ralstonia pseudosolanacearum GMI1000	36.173	100	0.372