Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AAG562_RS05015 Genome accession   NZ_CP152340
Coordinates   1074528..1074935 (+) Length   135 a.a.
NCBI ID   WP_342370091.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain NCIMB_885     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1069528..1079935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAG562_RS04985 (AAG562_04985) - 1069697..1070713 (-) 1017 WP_003282735.1 aspartate carbamoyltransferase catalytic subunit -
  AAG562_RS04990 (AAG562_04990) pyrR 1070769..1071281 (-) 513 WP_003282734.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AAG562_RS04995 (AAG562_04995) ruvX 1071303..1071731 (-) 429 WP_003282733.1 Holliday junction resolvase RuvX -
  AAG562_RS05000 (AAG562_05000) - 1071728..1072297 (-) 570 WP_003282732.1 YqgE/AlgH family protein -
  AAG562_RS05005 (AAG562_05005) - 1072361..1073254 (-) 894 WP_036991428.1 energy transducer TonB -
  AAG562_RS05010 (AAG562_05010) gshB 1073342..1074292 (-) 951 WP_003282730.1 glutathione synthase -
  AAG562_RS05015 (AAG562_05015) pilG 1074528..1074935 (+) 408 WP_342370091.1 twitching motility response regulator PilG Regulator
  AAG562_RS05020 (AAG562_05020) pilH 1074979..1075344 (+) 366 WP_003282728.1 twitching motility response regulator PilH -
  AAG562_RS05025 (AAG562_05025) - 1075386..1075922 (+) 537 WP_003282727.1 chemotaxis protein CheW -
  AAG562_RS05030 (AAG562_05030) - 1076003..1078051 (+) 2049 WP_003282725.1 methyl-accepting chemotaxis protein -
  AAG562_RS05035 (AAG562_05035) - 1078113..1078979 (+) 867 WP_003282724.1 protein-glutamate O-methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14884.25 Da        Isoelectric Point: 6.7135

>NTDB_id=988436 AAG562_RS05015 WP_342370091.1 1074528..1074935(+) (pilG) [Stutzerimonas stutzeri strain NCIMB_885]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCELIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=988436 AAG562_RS05015 WP_342370091.1 1074528..1074935(+) (pilG) [Stutzerimonas stutzeri strain NCIMB_885]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGTACCGCTGAAACCCTGCT
GAAGAAAGTAGGATGCGATGTCATCACCGCAGTGGACGGTTTCGATGCGCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTCGTCGATATTATGATGCCTAGGCTGGACGGCTATCAGACCTGCGAGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCTAAAGGGCGTATTGTCGGTTCCGATCAATA
CCTCACCAAGCCGTTCAGCAAAGAAGAGCTGCTCGGTGCGATCAAGGCGCATGTGCCTGATTTTGCACCGGTGGAGCAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696
  vicR Streptococcus mutans UA159

42.857

93.333

0.4

Multiple sequence alignment