Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   AAEU35_RS10355 Genome accession   NZ_CP152294
Coordinates   2040746..2041447 (+) Length   233 a.a.
NCBI ID   WP_058223189.1    Uniprot ID   -
Organism   Lactococcus lactis strain Q13     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2035746..2046447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAEU35_RS10340 - 2038141..2039049 (+) 909 WP_058223188.1 diacylglycerol kinase family protein -
  AAEU35_RS10345 - 2039196..2039882 (+) 687 WP_004255158.1 amino acid ABC transporter permease -
  AAEU35_RS10350 - 2039882..2040616 (+) 735 WP_004255171.1 amino acid ABC transporter ATP-binding protein -
  AAEU35_RS10355 mecA 2040746..2041447 (+) 702 WP_058223189.1 adaptor protein MecA Regulator
  AAEU35_RS10360 - 2041450..2042781 (+) 1332 WP_021722251.1 MraY family glycosyltransferase -
  AAEU35_RS10365 sufC 2042956..2043726 (+) 771 WP_004255181.1 Fe-S cluster assembly ATPase SufC -
  AAEU35_RS10370 sufD 2043903..2045159 (+) 1257 WP_021722250.1 Fe-S cluster assembly protein SufD -
  AAEU35_RS10375 - 2045159..2046376 (+) 1218 WP_058223190.1 cysteine desulfurase -

Sequence


Protein


Download         Length: 233 a.a.        Molecular weight: 27091.48 Da        Isoelectric Point: 4.1246

>NTDB_id=988201 AAEU35_RS10355 WP_058223189.1 2040746..2041447(+) (mecA) [Lactococcus lactis strain Q13]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNLGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=988201 AAEU35_RS10355 WP_058223189.1 2040746..2041447(+) (mecA) [Lactococcus lactis strain Q13]
ATGAAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATTTGGGAATGTTAACTTTCCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAAGCGATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTTGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATCGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.142

100

0.991

  mecA Lactococcus lactis subsp. cremoris KW2

96.567

100

0.966


Multiple sequence alignment