Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   ACAK38_RS18095 Genome accession   NZ_AP031583
Coordinates   3760338..3760973 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain JUNP514     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3755338..3765973
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAK38_RS18075 (JUNP514_3608) - 3755416..3756231 (+) 816 WP_000011164.1 DsbC family protein -
  ACAK38_RS18080 (JUNP514_3609) - 3756476..3757777 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  ACAK38_RS18085 (JUNP514_3610) thrC 3757833..3758972 (+) 1140 WP_000063593.1 threonine synthase -
  ACAK38_RS18090 (JUNP514_3611) pbpG 3759079..3760125 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  ACAK38_RS18095 (JUNP514_3612) letA 3760338..3760973 (+) 636 WP_000633799.1 response regulator Regulator
  ACAK38_RS18100 (JUNP514_3613) pilS 3760984..3762552 (+) 1569 WP_005129877.1 PAS domain-containing sensor histidine kinase Regulator
  ACAK38_RS18105 (JUNP514_3614) - 3762576..3763997 (+) 1422 WP_000840549.1 sigma-54 dependent transcriptional regulator -
  ACAK38_RS18110 (JUNP514_3615) - 3764001..3765185 (-) 1185 WP_000939106.1 S41 family peptidase -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=98818 ACAK38_RS18095 WP_000633799.1 3760338..3760973(+) (letA) [Acinetobacter baumannii strain JUNP514]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=98818 ACAK38_RS18095 WP_000633799.1 3760338..3760973(+) (letA) [Acinetobacter baumannii strain JUNP514]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCCCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACGAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment