Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | KNP07_RS24455 | Genome accession | NZ_CP152075 |
| Coordinates | 5250133..5250690 (+) | Length | 185 a.a. |
| NCBI ID | WP_003110422.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain NCTR 501 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5245133..5255690
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KNP07_RS24435 (KNP07_24440) | pilR | 5246409..5247746 (+) | 1338 | WP_217385353.1 | two-component system response regulator PilR | Regulator |
| KNP07_RS24440 (KNP07_24445) | thiO | 5247792..5248886 (-) | 1095 | WP_049270875.1 | glycine oxidase ThiO | - |
| KNP07_RS24445 (KNP07_24450) | - | 5249021..5249530 (+) | 510 | WP_023088572.1 | Tfp pilus assembly protein FimT/FimU | - |
| KNP07_RS24450 (KNP07_24455) | - | 5249636..5250142 (+) | 507 | WP_003102598.1 | Tfp pilus assembly protein FimT/FimU | - |
| KNP07_RS24455 (KNP07_24460) | pilV | 5250133..5250690 (+) | 558 | WP_003110422.1 | type 4a pilus minor pilin PilV | Machinery gene |
| KNP07_RS24460 (KNP07_24465) | pilW | 5250687..5251511 (+) | 825 | WP_003119422.1 | type 4a pilus minor pilin PilW | - |
| KNP07_RS24465 (KNP07_24470) | pilX | 5251508..5252095 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| KNP07_RS24470 (KNP07_24475) | pilY1 | 5252107..5255592 (+) | 3486 | WP_128672593.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20072.23 Da Isoelectric Point: 7.9204
>NTDB_id=987212 KNP07_RS24455 WP_003110422.1 5250133..5250690(+) (pilV) [Pseudomonas aeruginosa strain NCTR 501]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=987212 KNP07_RS24455 WP_003110422.1 5250133..5250690(+) (pilV) [Pseudomonas aeruginosa strain NCTR 501]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCGGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACACCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTTGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCGGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACACCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTTGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.378 |
100 |
0.984 |