Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   AAFP34_RS08400 Genome accession   NZ_CP152060
Coordinates   1784935..1786212 (-) Length   425 a.a.
NCBI ID   WP_021730799.1    Uniprot ID   -
Organism   Lactiplantibacillus paraplantarum strain lb01     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1779935..1791212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAFP34_RS08395 (AAFP34_08395) - 1783186..1784895 (-) 1710 WP_021730800.1 proline--tRNA ligase -
  AAFP34_RS08400 (AAFP34_08400) eeP 1784935..1786212 (-) 1278 WP_021730799.1 RIP metalloprotease RseP Regulator
  AAFP34_RS08405 (AAFP34_08405) - 1786250..1787035 (-) 786 WP_021730798.1 phosphatidate cytidylyltransferase -
  AAFP34_RS08410 (AAFP34_08410) - 1787051..1787830 (-) 780 WP_021730797.1 isoprenyl transferase -
  AAFP34_RS08415 (AAFP34_08415) frr 1787950..1788513 (-) 564 WP_021730796.1 ribosome recycling factor -
  AAFP34_RS08420 (AAFP34_08420) pyrH 1788515..1789237 (-) 723 WP_021730795.1 UMP kinase -
  AAFP34_RS08425 (AAFP34_08425) tsf 1789437..1790315 (-) 879 WP_021730794.1 translation elongation factor Ts -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45969.55 Da        Isoelectric Point: 9.9189

>NTDB_id=987066 AAFP34_RS08400 WP_021730799.1 1784935..1786212(-) (eeP) [Lactiplantibacillus paraplantarum strain lb01]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQVGQDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDETEVKRYSVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTAHSVARQAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQQLKLTIKRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=987066 AAFP34_RS08400 WP_021730799.1 1784935..1786212(-) (eeP) [Lactiplantibacillus paraplantarum strain lb01]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGTATCTTGGTCATCGTCCATGAGTTTGGGCACTTTTACTTCGC
CAAAAAGGCTGGAATTTTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCCACGA
CCTATACGTTACGGTTTTTACCAATTGGGGGCTACGTGCGGATGGCAGGTGTCGCCGATGATGAGGATGAAGAACTCAAA
CCAGGGACACCAGTAAGCTTGCAAGTCGGTCAGGATGGGATTGTTCATTCGATCAATGCTAGTAAAAAAACAACGTTGTT
CAATGGAATTCCGCTATCGGTAACGGCCACTGATCTAGAAAAAGAACTCTGGATCGAAGGTTACGAAAATGGTGACGAAA
CTGAAGTGAAACGATATTCTGTCGATCATGATGCGACCATTGTGGAAAGTGACGGGACTGAAGTTCAAATTGCCCCGGTC
GACGTTCAGTTTCAATCGGCCAAACTTTGGCAACGTATGTTGACCAATTTTGCTGGTCCGATGAATAATTTCATTCTGGC
CATCATTACCTTTGCCATTTTAGCTTTTATGCAAGGGGGGGTCACCAGTACGACGACCCACGTTGCAGCGACAACGGCTC
ACTCAGTCGCACGACAAGCTGGCATTCAAAAGGGTGATCAGATTGTGGCCGTAAATGGTAAAAAAATGACGAGTGCGCAA
TCAATTTCGTTATTGATTCAGGACAGCCCCAAGCAACAATTAAAGTTGACCATCAAACGGGCGGGACAGACTAAAAAAAT
TGCAGTCACGCCCGCTGCAAAGACGGTTTCTGGTAATCGAATCGGTCAAATTGGGGTCCAATGGGCCACTAAGACGGATA
CGAGTCTAGGTGCTAAGTTGGCATATGGGTTTACTGGCTCGTGGGGAATCACGAAGCAGATTTTTCAAGTGCTCGGGCGG
ATGGTTACCCATGGTTTTAGTTTGAATGATTTAGGGGGGCCCGTGGCAATCTTTGCAACGACTTCTCAAGCGGCTAAATC
TGGTGTGCGCACTGTGATTTACTTGCTGGCTGTGTTATCGATCAACCTCGGAATTGTCAATTTATTGCCAATTCCAGCCC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGAGGTAAGCCACTACGAGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGATTTGGCCTTTTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAACGGTATTTCTTCTAA

Domains


Predicted by InterproScan.

(7-411)

(211-260)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494

  eeP Streptococcus thermophilus LMG 18311

49.065

100

0.494


Multiple sequence alignment