Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHB67_RS11300 | Genome accession | NZ_CP152051 |
| Coordinates | 2251572..2251907 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL H8-0516 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2246572..2256907
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHB67_RS11280 (MHB67_11280) | gcvT | 2247052..2248149 (-) | 1098 | WP_024427995.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHB67_RS11285 (MHB67_11285) | - | 2248710..2250380 (+) | 1671 | WP_024427994.1 | SNF2-related protein | - |
| MHB67_RS11290 (MHB67_11290) | - | 2250395..2251192 (+) | 798 | WP_103131953.1 | YqhG family protein | - |
| MHB67_RS11295 (MHB67_11295) | - | 2251374..2251538 (+) | 165 | WP_073206269.1 | anti-repressor SinI family protein | - |
| MHB67_RS11300 (MHB67_11300) | sinR | 2251572..2251907 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| MHB67_RS11305 (MHB67_11305) | - | 2251975..2252775 (-) | 801 | WP_024422970.1 | TasA family protein | - |
| MHB67_RS11310 (MHB67_11310) | - | 2252830..2253402 (-) | 573 | WP_024422971.1 | signal peptidase I | - |
| MHB67_RS11315 (MHB67_11315) | tapA | 2253455..2253982 (-) | 528 | WP_103131952.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHB67_RS11320 (MHB67_11320) | - | 2254282..2254560 (+) | 279 | WP_171464609.1 | DUF3889 domain-containing protein | - |
| MHB67_RS11325 (MHB67_11325) | - | 2254595..2254789 (-) | 195 | WP_024422974.1 | YqzE family protein | - |
| MHB67_RS11330 (MHB67_11330) | comGG | 2254849..2255232 (-) | 384 | WP_103131951.1 | competence type IV pilus minor pilin ComGG | - |
| MHB67_RS11335 (MHB67_11335) | comGF | 2255229..2255756 (-) | 528 | WP_258011119.1 | competence type IV pilus minor pilin ComGF | - |
| MHB67_RS11340 (MHB67_11340) | comGE | 2255668..2255982 (-) | 315 | WP_073206282.1 | competence type IV pilus minor pilin ComGE | - |
| MHB67_RS11345 (MHB67_11345) | comGD | 2255966..2256412 (-) | 447 | WP_103131949.1 | competence type IV pilus minor pilin ComGD | - |
| MHB67_RS11350 (MHB67_11350) | comGC | 2256405..2256698 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=986928 MHB67_RS11300 WP_024422969.1 2251572..2251907(+) (sinR) [Bacillus sp. FSL H8-0516]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=986928 MHB67_RS11300 WP_024422969.1 2251572..2251907(+) (sinR) [Bacillus sp. FSL H8-0516]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |