Detailed information NTG0986784

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHH29_RS05235
• Genome accession: NZ_CP152048
• Coordinates: 990994..991680 (-)
• Length: 228 a.a.
• NCBI ID: WP_172793290.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-0046
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 985994..996680

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHH29_RS05200 (MHH29_05200)	fliW	986130..986564 (-)	435	WP_025208061.1	flagellar assembly protein FliW	-
MHH29_RS05205 (MHH29_05205)	-	986593..987171 (-)	579	WP_342495007.1	DUF6470 family protein	-
MHH29_RS05210 (MHH29_05210)	flgL	987218..988129 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
MHH29_RS05215 (MHH29_05215)	flgK	988138..989658 (-)	1521	WP_058336981.1	flagellar hook-associated protein FlgK	-
MHH29_RS05220 (MHH29_05220)	-	989674..990156 (-)	483	WP_007499977.1	flagellar protein FlgN	-
MHH29_RS05225 (MHH29_05225)	flgM	990175..990438 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHH29_RS05230 (MHH29_05230)	-	990518..990937 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
MHH29_RS05235 (MHH29_05235)	comFC	990994..991680 (-)	687	WP_172793290.1	ComF family protein	Machinery gene
MHH29_RS05240 (MHH29_05240)	-	991677..991970 (-)	294	WP_008348267.1	competence protein ComFB	-
MHH29_RS05245 (MHH29_05245)	comFA	992035..993162 (-)	1128	WP_082136017.1	DEAD/DEAH box helicase	Machinery gene
MHH29_RS05250 (MHH29_05250)	-	993534..994376 (-)	843	WP_024719242.1	DegV family protein	-
MHH29_RS05255 (MHH29_05255)	degU	994588..995277 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHH29_RS05260 (MHH29_05260)	degS	995342..996517 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26116.62 Da
• Isoelectric Point: 10.1473

>NTDB_id=986784 MHH29_RS05235 WP_172793290.1 990994..991680(-) (comFC) [Bacillus sp. FSL K6-0046]
MICPICESHFVAAFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWDKRRDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QSKQSKKRKNERLHQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=986784 MHH29_RS05235 WP_172793290.1 990994..991680(-) (comFC) [Bacillus sp. FSL K6-0046]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGCTTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCTAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAGGATTGTTCAAGGTGGGATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGTAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (161-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	38.428	100	0.386
comFC/cflB	Streptococcus mitis NCTC 12261	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.373