Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MHH29_RS03600 Genome accession   NZ_CP152048
Coordinates   666110..666751 (-) Length   213 a.a.
NCBI ID   WP_007500477.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0046     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 661110..671751
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH29_RS03565 (MHH29_03565) - 662238..662669 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  MHH29_RS03570 (MHH29_03570) - 662669..663010 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  MHH29_RS03575 (MHH29_03575) - 663003..664481 (+) 1479 WP_342461934.1 Na+/H+ antiporter subunit D -
  MHH29_RS03580 (MHH29_03580) - 664488..664967 (+) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  MHH29_RS03585 (MHH29_03585) - 664967..665248 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  MHH29_RS03590 (MHH29_03590) mnhG 665232..665606 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  MHH29_RS03595 (MHH29_03595) - 665697..666086 (-) 390 WP_017358943.1 hotdog fold thioesterase -
  MHH29_RS03600 (MHH29_03600) comA 666110..666751 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  MHH29_RS03605 (MHH29_03605) comP 666832..669138 (-) 2307 WP_268361539.1 ATP-binding protein Regulator
  MHH29_RS03610 (MHH29_03610) comX 669152..669322 (-) 171 WP_034317154.1 competence pheromone ComX -
  MHH29_RS03615 (MHH29_03615) - 669300..670223 (-) 924 WP_008345863.1 polyprenyl synthetase family protein -
  MHH29_RS03620 (MHH29_03620) degQ 670375..670515 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  MHH29_RS03625 (MHH29_03625) - 671021..671374 (+) 354 WP_342494939.1 inner spore coat protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24140.53 Da        Isoelectric Point: 4.5688

>NTDB_id=986778 MHH29_RS03600 WP_007500477.1 666110..666751(-) (comA) [Bacillus sp. FSL K6-0046]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEGAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNQQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=986778 MHH29_RS03600 WP_007500477.1 666110..666751(-) (comA) [Bacillus sp. FSL K6-0046]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGATCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGGCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATCTTGA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCCAAACAAATTCTAGAAACGAATCAACAAGTGAAAATTATC
ATTTATACAGGATATGAAGTAGATGATTATTTCGAAGAGGCCATTCGAGCTGGATTGCATGGTGCAATAAGTAAAACAGA
GACAAAAGACAAAATCATTGAATACATACACCGCACATTGCAAGGAGAAGTTGTCATTCAGCTATCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAGAAGCCAGAACAGGCGCAGCAGACGGATCATGAGCTGCTAACAGAGCGTGAATGTTTAATC
TTAAGAGAAGTGGAAAAAGGGTACACAAACCAAGAGATCGCCGATGTGCTTCATTTGAGCAAACGCTCGATTGAATACAG
TTTGACCTCCATCTTTAATAAGCTGAATGTTGGATCTCGAACAGAAGCGGTGTTAATTGCAAAATCGGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-207)

Response regulator receiver domain (Response_reg)

(4-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.495

100

0.718

Multiple sequence alignment