Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MHH29_RS00200 | Genome accession | NZ_CP152048 |
| Coordinates | 34866..35201 (+) | Length | 111 a.a. |
| NCBI ID | WP_017357978.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL K6-0046 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 29866..40201
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MHH29_RS00180 (MHH29_00180) | gcvT | 30343..31440 (-) | 1098 | WP_342494813.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MHH29_RS00185 (MHH29_00185) | - | 32002..33672 (+) | 1671 | WP_342494814.1 | SNF2-related protein | - |
| MHH29_RS00190 (MHH29_00190) | - | 33687..34484 (+) | 798 | WP_342494815.1 | YqhG family protein | - |
| MHH29_RS00195 (MHH29_00195) | - | 34668..34832 (+) | 165 | WP_008342197.1 | anti-repressor SinI family protein | - |
| MHH29_RS00200 (MHH29_00200) | sinR | 34866..35201 (+) | 336 | WP_017357978.1 | helix-turn-helix domain-containing protein | Regulator |
| MHH29_RS00205 (MHH29_00205) | - | 35269..36069 (-) | 801 | WP_008342195.1 | TasA family protein | - |
| MHH29_RS00210 (MHH29_00210) | - | 36128..36700 (-) | 573 | WP_017357979.1 | signal peptidase I | - |
| MHH29_RS00215 (MHH29_00215) | tapA | 36750..37277 (-) | 528 | WP_056705241.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MHH29_RS00220 (MHH29_00220) | - | 37530..37856 (+) | 327 | WP_058336653.1 | DUF3889 domain-containing protein | - |
| MHH29_RS00225 (MHH29_00225) | - | 37891..38085 (-) | 195 | WP_024718846.1 | YqzE family protein | - |
| MHH29_RS00230 (MHH29_00230) | comGG | 38146..38529 (-) | 384 | WP_342494816.1 | competence type IV pilus minor pilin ComGG | - |
| MHH29_RS00235 (MHH29_00235) | comGF | 38526..39023 (-) | 498 | WP_216894677.1 | competence type IV pilus minor pilin ComGF | - |
| MHH29_RS00240 (MHH29_00240) | comGE | 38965..39279 (-) | 315 | WP_039166034.1 | competence type IV pilus minor pilin ComGE | - |
| MHH29_RS00245 (MHH29_00245) | comGD | 39263..39709 (-) | 447 | WP_096881621.1 | competence type IV pilus minor pilin ComGD | - |
| MHH29_RS00250 (MHH29_00250) | comGC | 39702..39995 (-) | 294 | WP_008342186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12936.47 Da Isoelectric Point: 4.8062
>NTDB_id=986766 MHH29_RS00200 WP_017357978.1 34866..35201(+) (sinR) [Bacillus sp. FSL K6-0046]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=986766 MHH29_RS00200 WP_017357978.1 34866..35201(+) (sinR) [Bacillus sp. FSL K6-0046]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |