Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACOCJJ_RS01725 Genome accession   NZ_CP184561
Coordinates   386333..387178 (+) Length   281 a.a.
NCBI ID   WP_001825659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CBTW2018311     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 381333..392178
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOCJJ_RS01710 (ACOCJJ_01710) - 381599..383440 (-) 1842 WP_000077324.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  ACOCJJ_RS01715 (ACOCJJ_01715) metC 383409..384569 (-) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  ACOCJJ_RS01720 (ACOCJJ_01720) - 384566..385669 (-) 1104 WP_000655690.1 PLP-dependent transferase -
  ACOCJJ_RS01725 (ACOCJJ_01725) spo0J 386333..387178 (+) 846 WP_001825659.1 ParB/RepB/Spo0J family partition protein Regulator
  ACOCJJ_RS01730 (ACOCJJ_01730) - 387332..388213 (+) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  ACOCJJ_RS01735 (ACOCJJ_01735) - 388243..388446 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  ACOCJJ_RS01740 (ACOCJJ_01740) ychF 388458..389555 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  ACOCJJ_RS01745 (ACOCJJ_01745) - 389641..389832 (-) 192 WP_001052481.1 hypothetical protein -
  ACOCJJ_RS01750 (ACOCJJ_01750) rpsF 390076..390372 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  ACOCJJ_RS01755 (ACOCJJ_01755) ssbA 390393..390896 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  ACOCJJ_RS01760 (ACOCJJ_01760) rpsR 390948..391190 (+) 243 WP_000897044.1 30S ribosomal protein S18 -
  ACOCJJ_RS01765 (ACOCJJ_01765) - 391427..391654 (-) 228 Protein_350 Abi family protein -
  ACOCJJ_RS01770 (ACOCJJ_01770) - 391647..391923 (-) 277 Protein_351 site-specific integrase -

Sequence


Protein


Download         Length: 281 a.a.        Molecular weight: 32797.86 Da        Isoelectric Point: 10.0554

>NTDB_id=986724 ACOCJJ_RS01725 WP_001825659.1 386333..387178(+) (spo0J) [Staphylococcus aureus strain CBTW2018311]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=986724 ACOCJJ_RS01725 WP_001825659.1 386333..387178(+) (spo0J) [Staphylococcus aureus strain CBTW2018311]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381