Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   ACAK31_RS17385 Genome accession   NZ_AP031581
Coordinates   3606715..3607350 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain JUNP496     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3601715..3612350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAK31_RS17365 (JUNP496_3484) - 3601792..3602607 (+) 816 WP_004748539.1 DsbC family protein -
  ACAK31_RS17370 (JUNP496_3485) - 3602852..3604153 (+) 1302 WP_029574882.1 homoserine dehydrogenase -
  ACAK31_RS17375 (JUNP496_3486) thrC 3604209..3605348 (+) 1140 WP_000063593.1 threonine synthase -
  ACAK31_RS17380 (JUNP496_3487) pbpG 3605456..3606502 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  ACAK31_RS17385 (JUNP496_3488) letA 3606715..3607350 (+) 636 WP_000633799.1 response regulator Regulator
  ACAK31_RS17390 (JUNP496_3489) pilS 3607361..3608929 (+) 1569 WP_001160338.1 PAS domain-containing sensor histidine kinase Regulator
  ACAK31_RS17395 (JUNP496_3490) - 3608954..3610375 (+) 1422 WP_000840562.1 sigma-54 dependent transcriptional regulator -
  ACAK31_RS17400 (JUNP496_3491) - 3610379..3611563 (-) 1185 WP_000939109.1 S41 family peptidase -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=98665 ACAK31_RS17385 WP_000633799.1 3606715..3607350(+) (letA) [Acinetobacter baumannii strain JUNP496]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=98665 ACAK31_RS17385 WP_000633799.1 3606715..3607350(+) (letA) [Acinetobacter baumannii strain JUNP496]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTGCTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment